{
    "type": "genome",
    "identifier": "GCF_011045095.1",
    "organism": "Grimontia sedimenti",
    "title": "Grimontia sedimenti",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Kuwait University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_011045095.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN14145850",
        "wgs_master": "JAALDL000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2711294",
        "species_taxid": "2711294",
        "organism_name": "Grimontia sedimenti",
        "infraspecific_name": "strain=S25",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/03/01",
        "asm_name": "ASM1104509v1",
        "asm_submitter": "Kuwait University",
        "gbrs_paired_asm": "GCA_011045095.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/045/095/GCF_011045095.1_ASM1104509v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "5135518",
        "genome_size_ungapped": "5135518",
        "gc_percent": "49.000000",
        "replicon_count": "0",
        "scaffold_count": "83",
        "contig_count": "83",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_011045095.1-RS_2024_08_01",
        "annotation_date": "2024-08-01",
        "total_gene_count": "4745",
        "protein_coding_gene_count": "4467",
        "non_coding_gene_count": "134",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-03-01",
    "dateModified": "2020-03-01",
    "datePublished": "2020-03-01",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Grimontia sedimenti"
        ],
        "sample_taxid": [
            "2711294"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Kuwait: Arabian Gulf, Kubbar Island"
        ],
        "sample_host_location_id": [],
        "data_size": "1.470 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.46,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "5135518",
        "Number of Sequences": "83",
        "Longest Sequences (bp)": "622561",
        "N50 (bp)": "208501",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "48.8",
        "Number of CDSs": "4620",
        "Average Protein Length": "317.2",
        "Coding Ratio (%)": "85.6",
        "Number of rRNAs": "10",
        "Number of tRNAs": "96",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "relation_to_type": "type",
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                "taxid": 1056512,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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            {
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                "species_taxid": 646534,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Grimontia hollisae",
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Photobacterium galatheae",
                "strain": "strain=DSM 100496",
                "accession": "GCA_023653475.1",
                "taxid": 1654360,
                "species_taxid": 1654360,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio stylophorae",
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                "accession": "GCA_921293875.1",
                "taxid": 659351,
                "species_taxid": 659351,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.8308,
                "matched_fragments": 141,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Vibrio pomeroyi",
                "strain": "strain=LMG 20537",
                "accession": "GCA_024347595.1",
                "taxid": 198832,
                "species_taxid": 198832,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Enterobacter hormaechei",
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                "accession": "GCA_019048245.1",
                "taxid": 158836,
                "species_taxid": 158836,
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                "ani": 77.0192,
                "matched_fragments": 91,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Cronobacter sakazakii",
                "strain": "strain=ATCC 29544",
                "accession": "GCA_001971035.1",
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                "species_taxid": 28141,
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                "ani": 76.2515,
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                "status": "below_threshold"
            }
        ],
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                "accession": "GCF_011045095.1",
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                "matched_fragments": 1682,
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_000333895.2",
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            },
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        ]
    },
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}