{
    "type": "genome",
    "identifier": "GCF_011067135.1",
    "organism": "Solimonas terrae",
    "title": "Solimonas terrae",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Third Institute of Oceanography, State Oceanic Administration",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_011067135.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN14255442",
        "wgs_master": "JAAMOW000000000.1",
        "refseq_category": "reference genome",
        "taxid": "1396819",
        "species_taxid": "1396819",
        "organism_name": "Solimonas terrae",
        "infraspecific_name": "strain=KIS83-12",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/03/07",
        "asm_name": "ASM1106713v1",
        "asm_submitter": "Third Institute of Oceanography, State Oceanic Administration",
        "gbrs_paired_asm": "GCA_011067135.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/067/135/GCF_011067135.1_ASM1106713v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4420114",
        "genome_size_ungapped": "4420114",
        "gc_percent": "65.500000",
        "replicon_count": "0",
        "scaffold_count": "20",
        "contig_count": "20",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_011067135.1-RS_2024_07_15",
        "annotation_date": "2024-07-15",
        "total_gene_count": "4017",
        "protein_coding_gene_count": "3936",
        "non_coding_gene_count": "53",
        "pubmed_id": "24421276"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-03-07",
    "dateModified": "2020-03-07",
    "datePublished": "2020-03-07",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Solimonas terrae"
        ],
        "sample_taxid": [
            "1396819"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
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        ],
        "sample_host_location_id": [],
        "data_size": "1.205 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4420114",
        "Number of Sequences": "20",
        "Longest Sequences (bp)": "786783",
        "N50 (bp)": "466504",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "65.6",
        "Number of CDSs": "3933",
        "Average Protein Length": "339.7",
        "Coding Ratio (%)": "90.7",
        "Number of rRNAs": "3",
        "Number of tRNAs": "51",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
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                "species_taxid": 413479,
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                "status": "below_threshold"
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            {
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            {
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                "ani_threshold": 95,
                "status": "below_threshold"
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            {
                "organism_name": "Solimonas marina",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Luteimonas gilva",
                "strain": "strain=H23",
                "accession": "GCA_005239095.1",
                "taxid": 2572684,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Luteimonas lumbrici",
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                "accession": "GCA_006476065.1",
                "taxid": 2559601,
                "species_taxid": 2559601,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.5039,
                "matched_fragments": 150,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Thermomonas aquatica",
                "strain": "strain=SY21",
                "accession": "GCA_006337105.1",
                "taxid": 2202149,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Luteimonas saliphila",
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                "accession": "GCA_016774335.1",
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                "species_taxid": 2804919,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Lysobacter chinensis",
                "strain": "strain=TLK-CK17",
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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                "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Nevskiales;f__Nevskiaceae;g__Solimonas",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
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                "mean_intra_species_ani": "N/A",
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            {
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            },
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                "mean_intra_species_ani": "N/A",
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        ]
    },
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    "_genome_taxon": [
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}