{ "type": "genome", "identifier": "GCF_011308835.1", "organism": "Paracoccus xiamenensis", "title": "Paracoccus xiamenensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Third Institute of Oceanography, Ministry of Natural Resources", "publication": [ {} ], "properties": { "assembly_accession": "GCF_011308835.1", "bioproject": "PRJNA224116", "biosample": "SAMN14260430", "wgs_master": "JAAOHY000000000.1", "refseq_category": "reference genome", "taxid": "2714901", "species_taxid": "2714901", "organism_name": "Paracoccus xiamenensis", "infraspecific_name": "strain=12-3", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/03/16", "asm_name": "ASM1130883v1", "asm_submitter": "Third Institute of Oceanography, Ministry of Natural Resources", "gbrs_paired_asm": "GCA_011308835.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/308/835/GCF_011308835.1_ASM1130883v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3643702", "genome_size_ungapped": "3643702", "gc_percent": "64.000000", "replicon_count": "0", "scaffold_count": "21", "contig_count": "21", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_011308835.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "3588", "protein_coding_gene_count": "3490", "non_coding_gene_count": "52", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-03-16", "dateModified": "2020-03-16", "datePublished": "2020-03-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Paracoccus xiamenensis" ], "sample_taxid": [ "2714901" ], "sample_host_organism": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus pantotrophus", "strain": "strain=DSM 2944", "accession": "GCA_003633525.1", "taxid": 82367, "species_taxid": 82367, "relation_to_type": "type", "validated": true, "ani": 79.9958, "matched_fragments": 580, "total_fragments": 1204, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus binzhouensis", "strain": "strain=wg1", "accession": "GCA_016446475.1", "taxid": 2796149, "species_taxid": 2796149, "relation_to_type": "type", "validated": true, "ani": 79.9908, "matched_fragments": 577, "total_fragments": 1204, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paracoccus halophilus", "strain": "strain=JCM 14014", "accession": "GCA_000763905.1", "taxid": 376733, "species_taxid": 376733, "relation_to_type": "type", "validated": true, "ani": 79.9405, "matched_fragments": 573, "total_fragments": 1204, "ani_threshold": 95, "status": "below_threshold" }, { 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