{ "type": "genome", "identifier": "GCF_011316935.1", "organism": "Sphingobacterium chungjuense", "title": "Sphingobacterium chungjuense", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Inha University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_011316935.1", "bioproject": "PRJNA224116", "biosample": "SAMN13316409", "wgs_master": "WLYS00000000.1", "refseq_category": "reference genome", "taxid": "2675553", "species_taxid": "2675553", "organism_name": "Sphingobacterium chungjuense", "infraspecific_name": "strain=IMCC25678", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/03/16", "asm_name": "ASM1131693v1", "asm_submitter": "Inha University", "gbrs_paired_asm": "GCA_011316935.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/316/935/GCF_011316935.1_ASM1131693v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3868855", "genome_size_ungapped": "3868855", "gc_percent": "42.000000", "replicon_count": "0", "scaffold_count": "18", "contig_count": "18", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_011316935.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "3323", "protein_coding_gene_count": "3255", "non_coding_gene_count": "61", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-03-16", "dateModified": "2020-03-16", "datePublished": "2020-03-16", "_annotation": { "sample_count": 1, "sample_organism": [ "Sphingobacterium chungjuense" ], "sample_taxid": [ "2675553" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South 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1382456, "relation_to_type": "type", "validated": true, "ani": 77.2126, "matched_fragments": 88, "total_fragments": 1283, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pedobacter fastidiosus", "strain": "strain=CCM 8938", "accession": "GCA_014306625.1", "taxid": 2765361, "species_taxid": 2765361, "relation_to_type": "type", "validated": true, "ani": 76.6717, "matched_fragments": 50, "total_fragments": 1283, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_011316935.1", "gtdb_species": "s__Sphingobacterium sp011316935", "ani": 100.0, "matched_fragments": 1282, "total_fragments": 1283, "gtdb_taxonomy": "d__Bacteria;p__Bacteroidota;c__Bacteroidia;o__Sphingobacteriales;f__Sphingobacteriaceae;g__Sphingobacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", 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