{ "type": "genome", "identifier": "GCF_011382985.1", "organism": "Leucobacter coleopterorum", "title": "Leucobacter coleopterorum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Kyung Hee University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_011382985.1", "bioproject": "PRJNA224116", "biosample": "SAMN14260663", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2714933", "species_taxid": "2714933", "organism_name": "Leucobacter coleopterorum", "infraspecific_name": "strain=HDW9A", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/03/17", "asm_name": "ASM1138298v1", "asm_submitter": "Kyung Hee University", "gbrs_paired_asm": "GCA_011382985.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/382/985/GCF_011382985.1_ASM1138298v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3215551", "genome_size_ungapped": "3215551", "gc_percent": "60.500000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_011382985.1-RS_2024_04_23", "annotation_date": "2024-04-23", "total_gene_count": "3222", "protein_coding_gene_count": "2797", "non_coding_gene_count": "54", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-03-17", "dateModified": "2020-03-17", "datePublished": "2020-03-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Leucobacter coleopterorum" ], "sample_taxid": [ "2714933" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], 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"GCA_004217175.1", "taxid": 340320, "species_taxid": 340320, "relation_to_type": "suspected-type", "validated": true, "ani": 78.6387, "matched_fragments": 325, "total_fragments": 1071, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter japonicus", "strain": "strain=CBX130", "accession": "GCA_001273855.1", "taxid": 1461259, "species_taxid": 1461259, "relation_to_type": "type", "validated": true, "ani": 78.6269, "matched_fragments": 273, "total_fragments": 1071, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter ruminantium", "strain": "strain=A2", "accession": "GCA_017565705.1", "taxid": 1289170, "species_taxid": 1289170, "relation_to_type": "type", "validated": true, "ani": 78.5622, "matched_fragments": 263, "total_fragments": 1071, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leucobacter celer subsp. astrifaciens", "strain": "strain=CBX151", "accession": "GCA_001273835.1", "taxid": 1461260, 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true, "ani": 78.2492, "matched_fragments": 256, "total_fragments": 1071, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microcella putealis", "strain": "strain=CV2", "accession": "GCA_004216575.1", "taxid": 337005, "species_taxid": 337005, "relation_to_type": "type", "validated": true, "ani": 77.8578, "matched_fragments": 74, "total_fragments": 1071, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microcella putealis", "strain": "strain=DSM 19627", "accession": "GCA_006716545.1", "taxid": 337005, "species_taxid": 337005, "relation_to_type": "type", "validated": true, "ani": 77.7641, "matched_fragments": 80, "total_fragments": 1071, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marisediminicola antarctica", "strain": "strain=ZS314", "accession": "GCA_009930795.1", "taxid": 674079, "species_taxid": 674079, "relation_to_type": "type", "validated": true, "ani": 77.1738, "matched_fragments": 82, "total_fragments": 1071, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agrococcus lahaulensis", "strain": "strain=DSM 17612", "accession": "GCA_000425105.1", "taxid": 341722, "species_taxid": 341722, "relation_to_type": "type", "validated": true, "ani": 77.1436, "matched_fragments": 100, "total_fragments": 1071, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.62, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_011382985.1", "gtdb_species": "s__Leucobacter coleopterorum", "ani": 100.0, "matched_fragments": 1071, "total_fragments": 1071, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Leucobacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": 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