{ "type": "genome", "identifier": "GCF_011750795.2", "organism": "Arthrobacter sedimenti", "title": "Arthrobacter sedimenti", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Jilin Agricultural University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_011750795.2", "bioproject": "PRJNA224116", "biosample": "SAMN13707190", "wgs_master": "WVUN00000000.1", "refseq_category": "reference genome", "taxid": "2694931", "species_taxid": "2694931", "organism_name": "Arthrobacter sedimenti", "infraspecific_name": "strain=MIC A30", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/03/25", "asm_name": "ASM1175079v2", "asm_submitter": "Jilin Agricultural University", "gbrs_paired_asm": "GCA_011750795.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/750/795/GCF_011750795.2_ASM1175079v2", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4420777", "genome_size_ungapped": "4420777", "gc_percent": "67.000000", "replicon_count": "0", "scaffold_count": "44", "contig_count": "44", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_011750795.2-RS_2024_12_09", "annotation_date": "2024-12-09", "total_gene_count": "4118", "protein_coding_gene_count": "3951", "non_coding_gene_count": "66", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-03-25", "dateModified": "2020-03-25", "datePublished": "2020-03-25", "_annotation": { "sample_count": 1, "sample_organism": [ "Arthrobacter sedimenti" ], "sample_taxid": [ "2694931" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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1410, "total_fragments": 1452, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Arthrobacter ruber", "strain": "strain=MDB1-42", "accession": "GCA_002954225.1", "taxid": 1258893, "species_taxid": 1258893, "relation_to_type": "type", "validated": true, "ani": 84.5897, "matched_fragments": 826, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter pityocampae", "strain": "strain=Tp2", "accession": "GCA_002927275.1", "taxid": 547334, "species_taxid": 547334, "relation_to_type": "type", "validated": true, "ani": 83.9268, "matched_fragments": 767, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter cheniae", "strain": "strain=Hz2", "accession": "GCA_003602275.1", "taxid": 1258888, "species_taxid": 1258888, "relation_to_type": "type", "validated": true, "ani": 83.6951, "matched_fragments": 875, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter bussei", "strain": "strain=KR32", "accession": "GCA_009377195.2", "taxid": 2594179, "species_taxid": 2594179, "relation_to_type": "type", "validated": true, "ani": 83.252, "matched_fragments": 799, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter agilis", "strain": "strain=DSM 20550", "accession": "GCA_006494655.1", "taxid": 37921, "species_taxid": 37921, "relation_to_type": "type", "validated": true, "ani": 82.9182, "matched_fragments": 750, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter zhaoguopingii", "strain": "strain=J391", "accession": "GCA_009828595.1", "taxid": 2681491, "species_taxid": 2681491, "relation_to_type": "type", "validated": true, "ani": 80.2587, "matched_fragments": 532, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter stackebrandtii", "strain": "strain=DSM 16005", "accession": "GCA_017876675.1", "taxid": 272161, "species_taxid": 272161, "relation_to_type": "type", "validated": true, "ani": 79.995, "matched_fragments": 355, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter alpinus", "strain": "strain=DSM 22274", "accession": "GCA_900105965.1", "taxid": 656366, "species_taxid": 656366, "relation_to_type": "suspected-type", "validated": true, "ani": 79.3852, "matched_fragments": 234, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter psychrochitiniphilus", "strain": "strain=DSM 23143", "accession": "GCA_013408645.1", "taxid": 291045, "species_taxid": 291045, "relation_to_type": "type", "validated": true, "ani": 79.1355, "matched_fragments": 179, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter glacialis", "strain": "strain=HLT2-12-2", "accession": "GCA_002909445.1", "taxid": 1664, "species_taxid": 1664, "relation_to_type": "type", "validated": true, "ani": 78.9519, "matched_fragments": 241, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter mobilis", "strain": "strain=E918", "accession": "GCA_012395835.1", "taxid": 2724944, "species_taxid": 2724944, "relation_to_type": "type", "validated": true, "ani": 78.6897, "matched_fragments": 373, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter sunyaminii", "strain": "strain=zg-ZUI122", "accession": "GCA_018866305.1", "taxid": 2816859, "species_taxid": 2816859, "relation_to_type": "type", "validated": true, "ani": 78.6685, "matched_fragments": 312, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter livingstonensis", "strain": "strain=LI2", "accession": "GCA_003219815.1", "taxid": 670078, "species_taxid": 670078, "relation_to_type": "type", "validated": true, "ani": 78.614, "matched_fragments": 309, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arthrobacter sunyaminii", "strain": "strain=zg-ZUI122", "accession": "GCA_017353495.1", "taxid": 2816859, "species_taxid": 2816859, "relation_to_type": "type", "validated": true, "ani": 78.5321, "matched_fragments": 313, "total_fragments": 1452, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 58.33, "strain_heterogeneity": 52.38 }, "gtdb_result": [ { "accession": "GCF_002157505.1", "gtdb_species": "s__Arthrobacter_D agilis_D", "ani": 99.9633, "matched_fragments": 1254, "total_fragments": 1452, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Micrococcaceae;g__Arthrobacter_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": 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