{
    "type": "genome",
    "identifier": "GCF_011927955.1",
    "organism": "Brevibacterium marinum",
    "title": "Brevibacterium marinum",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_011927955.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05878274",
        "wgs_master": "JAATJN000000000.1",
        "refseq_category": "reference genome",
        "taxid": "418643",
        "species_taxid": "418643",
        "organism_name": "Brevibacterium marinum",
        "infraspecific_name": "strain=DSM 18964",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/04/02",
        "asm_name": "ASM1192795v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_011927955.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/011/927/955/GCF_011927955.1_ASM1192795v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "4221031",
        "genome_size_ungapped": "4221031",
        "gc_percent": "64.500000",
        "replicon_count": "0",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_011927955.1-RS_2024_04_29",
        "annotation_date": "2024-04-29",
        "total_gene_count": "3809",
        "protein_coding_gene_count": "3709",
        "non_coding_gene_count": "63",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-04-02",
    "dateModified": "2020-04-02",
    "datePublished": "2020-04-02",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Brevibacterium marinum"
        ],
        "sample_taxid": [
            "418643"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "South Korea:Hwasun beach, Jeju"
        ],
        "sample_host_location_id": [],
        "data_size": "1.163 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "4221031",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "4221031",
        "N50 (bp)": "4221031",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "64.4",
        "Number of CDSs": "3781",
        "Average Protein Length": "332.9",
        "Coding Ratio (%)": "89.5",
        "Number of rRNAs": "8",
        "Number of tRNAs": "51",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Brevibacterium marinum",
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                "accession": "GCA_011927955.1",
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                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1406,
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Brevibacterium sandarakinum",
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                "species_taxid": 629680,
                "relation_to_type": "type",
                "validated": true,
                "ani": 85.9209,
                "matched_fragments": 1099,
                "total_fragments": 1407,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevibacterium antiquum",
                "strain": "strain=DSM 21545",
                "accession": "GCA_016107655.1",
                "taxid": 234835,
                "species_taxid": 234835,
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                "validated": true,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevibacterium aurantiacum",
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                "species_taxid": 273384,
                "relation_to_type": "type",
                "validated": true,
                "ani": 84.8053,
                "matched_fragments": 991,
                "total_fragments": 1407,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevibacterium zhoupengii",
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                "taxid": 2898795,
                "species_taxid": 2898795,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 1067,
                "total_fragments": 1407,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevibacterium siliguriense",
                "strain": "strain=DSM 23676",
                "accession": "GCA_900105315.1",
                "taxid": 1136497,
                "species_taxid": 1136497,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.0921,
                "matched_fragments": 848,
                "total_fragments": 1407,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Brevibacterium daeguense",
                "strain": "strain=DSM 27938",
                "accession": "GCA_021729135.1",
                "taxid": 909936,
                "species_taxid": 909936,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.5252,
                "matched_fragments": 322,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sediminivirga luteola",
                "strain": "strain=CGMCC 1.12785",
                "accession": "GCA_021729215.1",
                "taxid": 1774748,
                "species_taxid": 1774748,
                "relation_to_type": "type",
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                "ani": 77.0345,
                "matched_fragments": 199,
                "total_fragments": 1407,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Oerskovia douganii",
                "strain": "strain=Sa1BUA8",
                "accession": "GCA_015142735.1",
                "taxid": 2762210,
                "species_taxid": 2762210,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.2019,
                "matched_fragments": 135,
                "total_fragments": 1407,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
            "completeness": 100.0,
            "contamination": 0.0,
            "strain_heterogeneity": 0.0
        },
        "gtdb_result": [
            {
                "accession": "GCF_011927955.1",
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                "matched_fragments": 1406,
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Brevibacteriaceae;g__Brevibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Brevibacteriaceae;g__Brevibacterium",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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            },
            {
                "accession": "GCF_016107655.1",
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                "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Brevibacteriaceae;g__Brevibacterium",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCF_900169065.1",
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            {
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                "accession": "GCF_900169365.1",
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        ]
    },
    "_bac2feature": {
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    "_genome_taxon": [
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        "marinum"
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}