{ "type": "genome", "identifier": "GCF_012273655.1", "organism": "Streptomyces physcomitrii", "title": "Streptomyces physcomitrii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "School of life science", "publication": [ {} ], "properties": { "assembly_accession": "GCF_012273655.1", "bioproject": "PRJNA224116", "biosample": "SAMN14513151", "wgs_master": "JAAWWP000000000.1", "refseq_category": "reference genome", "taxid": "2724184", "species_taxid": "2724184", "organism_name": "Streptomyces physcomitrii", "infraspecific_name": "strain=LD120", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/04/12", "asm_name": "ASM1227365v1", "asm_submitter": "School of life science", "gbrs_paired_asm": "GCA_012273655.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/273/655/GCF_012273655.1_ASM1227365v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7635704", "genome_size_ungapped": "7635624", "gc_percent": "73.000000", "replicon_count": "0", "scaffold_count": "51", "contig_count": "51", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_012273655.1-RS_2024_09_29", "annotation_date": "2024-09-29", "total_gene_count": "6187", "protein_coding_gene_count": "5984", "non_coding_gene_count": "80", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-04-12", "dateModified": "2020-04-12", "datePublished": "2020-04-12", "_annotation": { "sample_count": 1, "sample_organism": [ "Streptomyces physcomitrii" ], "sample_taxid": [ "2724184" ], "sample_host_organism": [ "moss" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Kunming" ], "sample_host_location_id": [], "data_size": "2.025 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 1.04, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "7635704", "Number of Sequences": "51", "Longest Sequences (bp)": "770066", "N50 (bp)": "302607", "Gap Ratio (%)": "0.001048", "GCcontent (%)": "72.9", "Number of CDSs": "6221", "Average Protein Length": "351.8", "Coding Ratio (%)": "86.0", "Number of rRNAs": "5", "Number of tRNAs": "80", "Number of CRISPRs": "7" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Streptomyces physcomitrii", "strain": "strain=LD120", "accession": "GCA_012273655.1", "taxid": 2724184, "species_taxid": 2724184, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2517, "total_fragments": 2520, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Streptomyces sennicomposti", "strain": "strain=RCPT1-4", "accession": "GCA_019890635.1", "taxid": 2873384, "species_taxid": 2873384, "relation_to_type": "type", "validated": true, "ani": 82.0544, "matched_fragments": 1319, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces bauhiniae", "strain": "strain=Bv016", "accession": "GCA_004784475.1", "taxid": 2340725, "species_taxid": 2340725, "relation_to_type": "type", "validated": true, "ani": 81.9448, "matched_fragments": 1286, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces griseoluteus", "strain": "strain=JCM 4765", "accession": "GCA_004784465.1", "taxid": 29306, "species_taxid": 29306, "relation_to_type": "type", "validated": true, "ani": 81.9255, "matched_fragments": 1246, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces minutiscleroticus", "strain": "strain=JCM 4790", "accession": "GCA_014650875.1", "taxid": 68238, "species_taxid": 68238, "relation_to_type": "type", "validated": true, "ani": 81.9033, "matched_fragments": 1391, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces ardesiacus", "strain": "strain=NBRC 15402", "accession": "GCA_003112575.1", "taxid": 285564, "species_taxid": 285564, "relation_to_type": "type", "validated": true, "ani": 81.8109, "matched_fragments": 1367, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces parvulus", "strain": "strain=JCM 4068", "accession": "GCA_014648855.1", "taxid": 146923, "species_taxid": 146923, "relation_to_type": "type", "validated": true, "ani": 81.7545, "matched_fragments": 1415, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces harenosi", "strain": "strain=PRKS01-65", "accession": "GCA_011008945.1", "taxid": 2697029, "species_taxid": 2697029, "relation_to_type": "type", "validated": true, "ani": 81.7237, "matched_fragments": 1206, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces griseicoloratus", "strain": "strain=TRM S81-3", "accession": "GCA_014534645.1", "taxid": 2752516, "species_taxid": 2752516, "relation_to_type": "type", "validated": true, "ani": 81.6383, "matched_fragments": 1355, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces zinciresistens", "strain": "strain=K42", "accession": "GCA_000225525.2", "taxid": 1073330, "species_taxid": 1073330, "relation_to_type": "type", "validated": true, "ani": 81.6033, "matched_fragments": 1266, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces corchorusii", "strain": "strain=DSM 40340", "accession": "GCA_001514055.1", "taxid": 1903, "species_taxid": 1903, "relation_to_type": "type", "validated": true, "ani": 81.523, "matched_fragments": 1396, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces spinosus", "strain": "strain=SBTS01", "accession": "GCA_020400655.1", "taxid": 2872623, "species_taxid": 2872623, "relation_to_type": "type", "validated": true, "ani": 81.5204, "matched_fragments": 1363, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces panaciradicis", "strain": "strain=NBRC 109811", "accession": "GCA_023516615.1", "taxid": 1470261, "species_taxid": 1470261, "relation_to_type": "type", "validated": true, "ani": 81.4439, "matched_fragments": 1343, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces parvus", "strain": "strain=NRRL B-1455", "accession": "GCA_008632535.1", "taxid": 66428, "species_taxid": 66428, "relation_to_type": "type", "validated": true, "ani": 81.3661, "matched_fragments": 1222, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces apocyni", "strain": "strain=TRM 66233", "accession": "GCA_009739465.1", "taxid": 2654677, "species_taxid": 2654677, "relation_to_type": "type", "validated": true, "ani": 81.3529, "matched_fragments": 1173, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces brasiliensis", "strain": "strain=JCM 3086", "accession": "GCA_014647875.1", "taxid": 1954, "species_taxid": 1954, "relation_to_type": "type", "validated": true, "ani": 81.2858, "matched_fragments": 1335, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces roseicoloratus", "strain": "strain=TRM44457", "accession": "GCA_004117935.1", "taxid": 2508722, "species_taxid": 2508722, "relation_to_type": "type", "validated": true, "ani": 81.266, "matched_fragments": 1236, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces parvus", "strain": "strain=JCM 4069", "accession": "GCA_014648875.1", "taxid": 66428, "species_taxid": 66428, "relation_to_type": "type", "validated": true, "ani": 81.2556, "matched_fragments": 1341, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces microflavus", "strain": "strain=JCM 4496", "accession": "GCA_014650075.1", "taxid": 1919, "species_taxid": 1919, "relation_to_type": "type", "validated": true, "ani": 81.2341, "matched_fragments": 1323, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces badius", "strain": "strain=JCM 4350", "accession": "GCA_014649415.1", "taxid": 1941, "species_taxid": 1941, "relation_to_type": "type", "validated": true, "ani": 81.135, "matched_fragments": 1275, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces benahoarensis", "strain": "strain=MZ03-37", "accession": "GCA_007280575.1", "taxid": 2595054, "species_taxid": 2595054, "relation_to_type": "type", "validated": true, "ani": 81.0757, "matched_fragments": 1011, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces sporangiiformans", "strain": "strain=NEAU-SSA 1", "accession": "GCA_005768555.2", "taxid": 2315329, "species_taxid": 2315329, "relation_to_type": "type", "validated": true, "ani": 81.0698, "matched_fragments": 1301, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces sporangiiformans", "strain": "strain=NEAU-SSA 1", "accession": "GCA_003568675.1", "taxid": 2315329, "species_taxid": 2315329, "relation_to_type": "type", "validated": true, "ani": 81.0321, "matched_fragments": 1308, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces abyssomicinicus", "strain": "strain=CHI39", "accession": "GCA_008974245.1", "taxid": 574929, "species_taxid": 574929, "relation_to_type": "type", "validated": true, "ani": 80.9324, "matched_fragments": 1246, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces lycii", "strain": "strain=TRM 66187", "accession": "GCA_009735685.1", "taxid": 2654337, "species_taxid": 2654337, "relation_to_type": "type", "validated": true, "ani": 80.646, "matched_fragments": 1127, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinacidiphila alni", "strain": "strain=CGMCC 4.3510", "accession": "GCA_900112845.1", "taxid": 380248, "species_taxid": 380248, "relation_to_type": "type", "validated": true, "ani": 80.254, "matched_fragments": 1197, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Streptomyces rubrisoli", "strain": "strain=DSM 42083", "accession": "GCA_024436055.1", "taxid": 1387313, "species_taxid": 1387313, "relation_to_type": "type", "validated": true, "ani": 80.184, "matched_fragments": 1007, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora setae", "strain": "strain=NRRL B-16185", "accession": "GCA_000716965.1", "taxid": 2066, "species_taxid": 2066, "relation_to_type": "type", "validated": true, "ani": 78.7856, "matched_fragments": 1104, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kitasatospora setae", "strain": "strain=KM-6054", "accession": "GCA_000269985.1", "taxid": 2066, "species_taxid": 2066, "relation_to_type": "type", "validated": true, "ani": 78.7592, "matched_fragments": 1138, "total_fragments": 2520, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 1.04, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_012273655.1", "gtdb_species": "s__Streptomyces physcomitrii", "ani": 100.0, "matched_fragments": 2517, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.15", "min_intra_species_ani": "97.14", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.93", "num_clustered_genomes": 4, "status": "conclusive" }, { "accession": "GCF_013364195.1", "gtdb_species": "s__Streptomyces sp013364195", "ani": 84.7587, "matched_fragments": 1626, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_002154585.1", "gtdb_species": "s__Streptomyces pseudogriseolus", "ani": 81.9519, "matched_fragments": 1153, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.58", "min_intra_species_ani": "96.58", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.87", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_001654495.1", "gtdb_species": "s__Streptomyces sp001654495", "ani": 81.9305, "matched_fragments": 1391, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.91", "min_intra_species_ani": "96.91", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_014650475.1", "gtdb_species": "s__Streptomyces albogriseolus", "ani": 81.8837, "matched_fragments": 1327, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.59", "min_intra_species_ani": "97.23", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.90", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_014650875.1", "gtdb_species": "s__Streptomyces minutiscleroticus", "ani": 81.8711, "matched_fragments": 1397, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.56", "min_intra_species_ani": "98.56", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.90", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014648855.1", "gtdb_species": "s__Streptomyces parvulus", "ani": 81.8627, "matched_fragments": 1394, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.39", "min_intra_species_ani": "95.93", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.87", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_003664315.1", "gtdb_species": "s__Streptomyces sp003664315", "ani": 81.8133, "matched_fragments": 1397, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_014649355.1", "gtdb_species": "s__Streptomyces althioticus", "ani": 81.6539, "matched_fragments": 1336, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.374, "mean_intra_species_ani": "98.43", "min_intra_species_ani": "96.72", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.83", "num_clustered_genomes": 9, "status": "-" }, { "accession": "GCF_014596915.1", "gtdb_species": "s__Streptomyces sp014596915", "ani": 81.6235, "matched_fragments": 1377, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004342105.1", "gtdb_species": "s__Streptomyces sp004342105", "ani": 81.4319, "matched_fragments": 1331, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009604455.1", "gtdb_species": "s__Streptomyces sp009604455", "ani": 81.4115, "matched_fragments": 1360, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003610995.1", "gtdb_species": "s__Streptomyces sp003116725", "ani": 81.3719, "matched_fragments": 1295, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.40", "min_intra_species_ani": "95.27", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.85", "num_clustered_genomes": 7, "status": "-" }, { "accession": "GCF_003384795.1", "gtdb_species": "s__Streptomyces sp003384795", "ani": 81.3048, "matched_fragments": 1384, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_900105755.1", "gtdb_species": "s__Streptomyces sp900105755", "ani": 81.2957, "matched_fragments": 1402, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014649875.1", "gtdb_species": "s__Streptomyces rubiginosohelvolus", "ani": 81.286, "matched_fragments": 1316, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 96.2941, "mean_intra_species_ani": "98.09", "min_intra_species_ani": "96.67", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.87", "num_clustered_genomes": 22, "status": "-" }, { "accession": "GCF_014647875.1", "gtdb_species": "s__Streptomyces brasiliensis", "ani": 81.2729, "matched_fragments": 1337, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004117935.1", "gtdb_species": "s__Streptomyces roseicoloratus", "ani": 81.2305, "matched_fragments": 1243, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000718135.1", "gtdb_species": "s__Streptomyces cyaneofuscatus", "ani": 81.1498, "matched_fragments": 1322, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.78", "min_intra_species_ani": "95.81", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.85", "num_clustered_genomes": 12, "status": "-" }, { "accession": "GCF_001905345.1", "gtdb_species": "s__Streptomyces uncialis", "ani": 80.9743, "matched_fragments": 1308, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.41", "min_intra_species_ani": "97.41", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_012726235.1", "gtdb_species": "s__Streptomyces sp012726235", "ani": 80.2886, "matched_fragments": 1109, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000514715.1", "gtdb_species": "s__Streptomyces sp000514715", "ani": 79.5187, "matched_fragments": 1156, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002847285.1", "gtdb_species": "s__Streptomyces sp002847285", "ani": 79.4538, "matched_fragments": 1196, "total_fragments": 2520, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Streptomycetales;f__Streptomycetaceae;g__Streptomyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.16", "min_intra_species_ani": "95.03", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.85", "num_clustered_genomes": 4, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.201, "cell_length": -0.05, "doubling_h": 0.103, "growth_tmp": 27.757, "optimum_tmp": 29.036, "optimum_ph": 7.341, "genome_size": 8292419.302, "gc_content": 71.543, "coding_genes": 7141.289, "rRNA16S_genes": 6.155, "tRNA_genes": 67.804, "gram_stain": 0.998, "sporulation": 0.958, "motility": 0.049, "range_salinity": 0.666, "facultative_respiration": 0.0, "anaerobic_respiration": 0.005, "aerobic_respiration": 0.994, "mesophilic_range_tmp": 0.98, "thermophilic_range_tmp": 0.019, "psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.208, "coccus_cell_shape": 0.032, "filament_cell_shape": 0.582, "coccobacillus_cell_shape": 0.098, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.076 }, "_genome_taxon": [ "Streptomyces", "physcomitrii" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }