{ "type": "genome", "identifier": "GCF_012848855.1", "organism": "Pyruvatibacter mobilis", "title": "Pyruvatibacter mobilis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Shandong University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_012848855.1", "bioproject": "PRJNA224116", "biosample": "SAMN14610207", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1712261", "species_taxid": "1712261", "organism_name": "Pyruvatibacter mobilis", "infraspecific_name": "strain=CGMCC 1.15125", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/04/27", "asm_name": "ASM1284885v1", "asm_submitter": "Shandong University", "gbrs_paired_asm": "GCA_012848855.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/848/855/GCF_012848855.1_ASM1284885v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3333914", "genome_size_ungapped": "3333914", "gc_percent": "64.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_012848855.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "3112", "protein_coding_gene_count": "3046", "non_coding_gene_count": "53", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-04-27", "dateModified": "2020-04-27", "datePublished": "2020-04-27", "_annotation": { "sample_count": 1, "sample_organism": [ "Pyruvatibacter mobilis" ], "sample_taxid": [ "1712261" ], "sample_host_organism": [ "Picochloruma sp. 122" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "China:Guangzhou" ], "sample_host_location_id": [], "data_size": "0.924 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3333914", "Number of Sequences": "1", "Longest Sequences (bp)": "3333914", "N50 (bp)": "3333914", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "63.9", "Number of CDSs": "3111", "Average Protein Length": "318.2", "Coding Ratio (%)": "89.1", "Number of rRNAs": "3", "Number of tRNAs": "45", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Pyruvatibacter mobilis", "strain": "strain=CGMCC 1.15125", "accession": "GCA_012848855.1", "taxid": 1712261, "species_taxid": 1712261, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1110, "total_fragments": 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null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": null, "sporulation": null, "motility": null, "range_salinity": null, "facultative_respiration": null, "anaerobic_respiration": null, "aerobic_respiration": null, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": null, "coccus_cell_shape": null, "filament_cell_shape": null, "coccobacillus_cell_shape": null, "vibrio_cell_shape": null, "spiral_cell_shape": null }, "_genome_taxon": [ "Pyruvatibacter", "mobilis" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }