{
    "type": "genome",
    "identifier": "GCF_012911495.1",
    "organism": "Tepidiphilus baoligensis",
    "title": "Tepidiphilus baoligensis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute of Microbiology, CAS",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_012911495.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN13865277",
        "wgs_master": "JAAAUB000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2698687",
        "species_taxid": "2698687",
        "organism_name": "Tepidiphilus baoligensis",
        "infraspecific_name": "strain=B18-69",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/04/27",
        "asm_name": "ASM1291149v1",
        "asm_submitter": "Institute of Microbiology, CAS",
        "gbrs_paired_asm": "GCA_012911495.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/911/495/GCF_012911495.1_ASM1291149v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "2250378",
        "genome_size_ungapped": "2250378",
        "gc_percent": "64.500000",
        "replicon_count": "0",
        "scaffold_count": "51",
        "contig_count": "51",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_012911495.1-RS_2024_12_11",
        "annotation_date": "2024-12-11",
        "total_gene_count": "2222",
        "protein_coding_gene_count": "2083",
        "non_coding_gene_count": "55",
        "pubmed_id": "32318862"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-04-27",
    "dateModified": "2020-04-27",
    "datePublished": "2020-04-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Tepidiphilus baoligensis"
        ],
        "sample_taxid": [
            "2698687"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Inner Mongolia"
        ],
        "sample_host_location_id": [],
        "data_size": "0.625 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "2250378",
        "Number of Sequences": "51",
        "Longest Sequences (bp)": "366886",
        "N50 (bp)": "124613",
        "Gap Ratio (%)": "0.000622",
        "GCcontent (%)": "64.6",
        "Number of CDSs": "2131",
        "Average Protein Length": "324.2",
        "Coding Ratio (%)": "92.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "49",
        "Number of CRISPRs": "2"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Tepidiphilus baoligensis",
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                "species_taxid": 2698687,
                "relation_to_type": "type",
                "validated": true,
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                "total_fragments": 729,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
                "organism_name": "Tepidiphilus olei",
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                "accession": "GCA_006980705.1",
                "taxid": 2502184,
                "species_taxid": 2502184,
                "relation_to_type": "type",
                "validated": true,
                "ani": 96.8643,
                "matched_fragments": 636,
                "total_fragments": 729,
                "ani_threshold": 95,
                "status": "inconclusive"
            },
            {
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                "accession": "GCA_000425565.1",
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                "species_taxid": 203471,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tepidiphilus thermophilus",
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                "accession": "GCA_001517365.1",
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                "species_taxid": 876478,
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                "validated": true,
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                "matched_fragments": 594,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Tepidiphilus thermophilus",
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                "accession": "GCA_001418245.1",
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                "species_taxid": 876478,
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                "ani": 89.9407,
                "matched_fragments": 595,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Burkholderia thailandensis",
                "strain": "strain=E264; ATCC 700388",
                "accession": "GCA_000012365.1",
                "taxid": 57975,
                "species_taxid": 57975,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.0657,
                "matched_fragments": 122,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Burkholderia thailandensis",
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                "accession": "GCA_000152285.1",
                "taxid": 57975,
                "species_taxid": 57975,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.8462,
                "matched_fragments": 110,
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                "ani_threshold": 95,
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            }
        ],
        "cc_result": {
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            "contamination": 0.0,
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                "accession": "GCF_012911495.1",
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "97.01",
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                "mean_intra_species_af": "0.89",
                "min_intra_species_af": "0.87",
                "num_clustered_genomes": 3,
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            },
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                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
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            {
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        ]
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    "_bac2feature": {
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        "gram_stain": 0.0,
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        "bacillus_cell_shape": 1.0,
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        "baoligensis"
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    "quality": 4,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}