{
    "type": "genome",
    "identifier": "GCF_012912135.1",
    "organism": "Brasilonema bromeliae SPC951",
    "title": "Brasilonema bromeliae SPC951",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Sao Paulo State University (UNESP)",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_012912135.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN09468270",
        "wgs_master": "QMEB00000000.1",
        "refseq_category": "reference genome",
        "taxid": "385972",
        "species_taxid": "383615",
        "organism_name": "Brasilonema bromeliae SPC951",
        "infraspecific_name": "strain=SPC951",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/04/27",
        "asm_name": "ASM1291213v1",
        "asm_submitter": "Sao Paulo State University (UNESP)",
        "gbrs_paired_asm": "GCA_012912135.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/912/135/GCF_012912135.1_ASM1291213v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "6257395",
        "genome_size_ungapped": "6255964",
        "gc_percent": "43.000000",
        "replicon_count": "0",
        "scaffold_count": "447",
        "contig_count": "447",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_012912135.1-RS_2024_08_07",
        "annotation_date": "2024-08-07",
        "total_gene_count": "5713",
        "protein_coding_gene_count": "5373",
        "non_coding_gene_count": "55",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-04-27",
    "dateModified": "2020-04-27",
    "datePublished": "2020-04-27",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Brasilonema bromeliae SPC951"
        ],
        "sample_taxid": [
            "385972"
        ],
        "sample_host_organism": [
            "bromeliads"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "Brazil: Sao Paulo, Sao Paulo"
        ],
        "sample_host_location_id": [],
        "data_size": "1.800 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 91.2,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "6257395",
        "Number of Sequences": "447",
        "Longest Sequences (bp)": "66606",
        "N50 (bp)": "20812",
        "Gap Ratio (%)": "0.022869",
        "GCcontent (%)": "43.0",
        "Number of CDSs": "5188",
        "Average Protein Length": "298.6",
        "Coding Ratio (%)": "74.3",
        "Number of rRNAs": "1",
        "Number of tRNAs": "45",
        "Number of CRISPRs": "8"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Brasilonema bromeliae",
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                "relation_to_type": "type",
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            {
                "organism_name": "Brasilonema sennae",
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                "status": "below_threshold"
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            {
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                "matched_fragments": 731,
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                "ani_threshold": 95,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Chlorogloeopsis fritschii",
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                "accession": "GCA_003990575.1",
                "taxid": 1124,
                "species_taxid": 1124,
                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Nostoc favosum",
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                "accession": "GCA_020829495.1",
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                "species_taxid": 2907819,
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                "validated": true,
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                "matched_fragments": 600,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Fischerella muscicola",
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                "accession": "GCA_000317205.1",
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                "species_taxid": 92938,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Nostoc punctiforme",
                "strain": "strain=ATCC 29133; PCC 73102",
                "accession": "GCA_000020025.1",
                "taxid": 272131,
                "species_taxid": 272131,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.4623,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Aetokthonos hydrillicola",
                "strain": "strain=CCALA 1050",
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                "taxid": 1550245,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
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            },
            {
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                "accession": "GCA_000317225.1",
                "taxid": 372787,
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                "relation_to_type": "type",
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            }
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        "gtdb_result": [
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                "accession": "GCF_012912135.1",
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                "total_fragments": 1860,
                "gtdb_taxonomy": "d__Bacteria;p__Cyanobacteria;c__Cyanobacteriia;o__Cyanobacteriales;f__Nostocaceae;g__Brasilonema",
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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            {
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            },
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            },
            {
                "accession": "GCF_012912105.1",
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        ]
    },
    "_bac2feature": {
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        "mesophilic_range_tmp": null,
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        "bacillus_cell_shape": null,
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    },
    "_genome_taxon": [
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        "bromeliae",
        "SPC951"
    ],
    "quality": 3,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}