{ "type": "genome", "identifier": "GCF_012913485.1", "organism": "Luteolibacter luteus", "title": "Luteolibacter luteus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Kyonggi University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_012913485.1", "bioproject": "PRJNA224116", "biosample": "SAMN14642216", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "2728835", "species_taxid": "2728835", "organism_name": "Luteolibacter luteus", "infraspecific_name": "strain=G-1-1-1", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/04/28", "asm_name": "ASM1291348v1", "asm_submitter": "Kyonggi University", "gbrs_paired_asm": "GCA_012913485.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/913/485/GCF_012913485.1_ASM1291348v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6412079", "genome_size_ungapped": "6412079", "gc_percent": "61.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_012913485.1-RS_2024_05_06", "annotation_date": "2024-05-06", "total_gene_count": "5264", "protein_coding_gene_count": "5190", "non_coding_gene_count": "60", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-04-28", "dateModified": "2020-04-28", "datePublished": "2020-04-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Luteolibacter luteus" ], "sample_taxid": [ "2728835" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea: Suwon" ], 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"status": "conclusive" }, { "organism_name": "Luteolibacter ambystomatis", "strain": "strain=32A", "accession": "GCA_018137965.1", "taxid": 2824561, "species_taxid": 2824561, "relation_to_type": "type", "validated": true, "ani": 78.337, "matched_fragments": 406, "total_fragments": 2137, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Luteolibacter yonseiensis", "strain": "strain=JCM 18052", "accession": "GCA_016595465.1", "taxid": 1144680, "species_taxid": 1144680, "relation_to_type": "type", "validated": true, "ani": 77.3827, "matched_fragments": 280, "total_fragments": 2137, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Haloferula rosea", "strain": "strain=KCTC 22201", "accession": "GCA_016595525.1", "taxid": 490093, "species_taxid": 490093, "relation_to_type": "type", "validated": true, "ani": 77.3555, "matched_fragments": 204, "total_fragments": 2137, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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76.9294, "matched_fragments": 111, "total_fragments": 2137, "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Akkermansiaceae;g__Luteolibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_903826205.1", "gtdb_species": "s__Luteolibacter sp903826205", "ani": 76.2464, "matched_fragments": 112, "total_fragments": 2137, "gtdb_taxonomy": "d__Bacteria;p__Verrucomicrobiota;c__Verrucomicrobiae;o__Verrucomicrobiales;f__Akkermansiaceae;g__Luteolibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.67", "min_intra_species_ani": "99.65", "mean_intra_species_af": "0.89", "min_intra_species_af": "0.88", "num_clustered_genomes": 3, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.199, "cell_length": 0.156, "doubling_h": null, "growth_tmp": 28.5, "optimum_tmp": 27.75, "optimum_ph": 7.0, "genome_size": null, "gc_content": null, "coding_genes": null, "rRNA16S_genes": null, "tRNA_genes": null, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, "anaerobic_respiration": 0.0, "aerobic_respiration": 1.0, "mesophilic_range_tmp": null, "thermophilic_range_tmp": null, "psychrophilic_range_tmp": null, "bacillus_cell_shape": 1.0, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.0, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Luteolibacter", "luteus" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }