{ "type": "genome", "identifier": "GCF_012927105.1", "organism": "Sphingobium psychrophilum", "title": "Sphingobium psychrophilum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Kyonggi University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_012927105.1", "bioproject": "PRJNA224116", "biosample": "SAMN14642215", "wgs_master": "JABBFV000000000.1", "refseq_category": "reference genome", "taxid": "2728834", "species_taxid": "2728834", "organism_name": "Sphingobium psychrophilum", "infraspecific_name": "strain=AR-3-1", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/04/28", "asm_name": "ASM1292710v1", "asm_submitter": "Kyonggi University", "gbrs_paired_asm": "GCA_012927105.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/927/105/GCF_012927105.1_ASM1292710v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "5162327", "genome_size_ungapped": "5162327", "gc_percent": "63.000000", "replicon_count": "0", "scaffold_count": "83", "contig_count": "83", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_012927105.1-RS_2024_12_11", "annotation_date": "2024-12-11", "total_gene_count": "5100", "protein_coding_gene_count": "4905", "non_coding_gene_count": "60", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-04-28", "dateModified": "2020-04-28", "datePublished": "2020-04-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Sphingobium psychrophilum" ], "sample_taxid": [ "2728834" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Canada: Cambridge 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"N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_900013425.1", "gtdb_species": "s__Sphingobium sp900013425", "ani": 91.0246, "matched_fragments": 1136, "total_fragments": 1678, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.97", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_004152865.1", "gtdb_species": "s__Sphingobium cupriresistens", "ani": 90.4514, "matched_fragments": 1070, "total_fragments": 1678, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingobium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.64", "min_intra_species_ani": "98.49", "mean_intra_species_af": 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