{ "type": "genome", "identifier": "GCF_012927205.1", "organism": "Chitinophaga fulva", "title": "Chitinophaga fulva", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Kyonggi University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_012927205.1", "bioproject": "PRJNA224116", "biosample": "SAMN14642254", "wgs_master": "JABBGC000000000.1", "refseq_category": "reference genome", "taxid": "2728842", "species_taxid": "2728842", "organism_name": "Chitinophaga fulva", "infraspecific_name": "strain=G-6-1-13", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/04/28", "asm_name": "ASM1292720v1", "asm_submitter": "Kyonggi University", "gbrs_paired_asm": "GCA_012927205.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/927/205/GCF_012927205.1_ASM1292720v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "8371808", "genome_size_ungapped": "8371610", "gc_percent": "48.500000", "replicon_count": "0", "scaffold_count": "8", "contig_count": "8", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_012927205.1-RS_2024_10_23", "annotation_date": "2024-10-23", "total_gene_count": "6683", "protein_coding_gene_count": "6592", "non_coding_gene_count": "80", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-04-28", "dateModified": "2020-04-28", "datePublished": "2020-04-28", "_annotation": { "sample_count": 1, "sample_organism": [ "Chitinophaga fulva" ], "sample_taxid": [ "2728842" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea: Suwon" ], "sample_host_location_id": [], "data_size": "2.372 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "8371808", "Number of Sequences": "8", "Longest Sequences (bp)": "4152521", "N50 (bp)": "1756193", "Gap Ratio (%)": "0.002365", "GCcontent (%)": "48.7", "Number of CDSs": "6542", "Average Protein Length": "379.6", "Coding Ratio (%)": "89.0", "Number of rRNAs": "1", "Number of tRNAs": "70", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Chitinophaga fulva", "strain": "strain=G-6-1-13", "accession": "GCA_012927205.1", "taxid": 2728842, "species_taxid": 2728842, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 2787, "total_fragments": 2787, "ani_threshold": 95, 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