{ "type": "genome", "identifier": "GCF_012972675.1", "organism": "Pontixanthobacter rizhaonensis", "title": "Pontixanthobacter rizhaonensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Jining Medical University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_012972675.1", "bioproject": "PRJNA224116", "biosample": "SAMN14687699", "wgs_master": "JABCRE000000000.1", "refseq_category": "reference genome", "taxid": "2730337", "species_taxid": "2730337", "organism_name": "Pontixanthobacter rizhaonensis", "infraspecific_name": "strain=RZ02", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/05/04", "asm_name": "ASM1297267v1", "asm_submitter": "Jining Medical University", "gbrs_paired_asm": "GCA_012972675.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/012/972/675/GCF_012972675.1_ASM1297267v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2790898", "genome_size_ungapped": "2790898", "gc_percent": "55.500000", "replicon_count": "0", "scaffold_count": "4", "contig_count": "4", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_012972675.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "2650", "protein_coding_gene_count": "2592", "non_coding_gene_count": "48", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-05-04", "dateModified": "2020-05-04", "datePublished": "2020-05-04", "_annotation": { "sample_count": 1, "sample_organism": [ "Pontixanthobacter rizhaonensis" ], "sample_taxid": [ "2730337" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pontixanthobacter luteolus", "strain": "strain=SW-109", "accession": "GCA_009828095.1", "taxid": 295089, "species_taxid": 295089, "relation_to_type": "type", "validated": true, "ani": 77.9352, "matched_fragments": 275, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania psychrotolerans", "strain": "strain=1XM2-8", "accession": "GCA_019711355.1", "taxid": 2867238, "species_taxid": 2867238, "relation_to_type": "type", "validated": true, "ani": 77.4648, "matched_fragments": 112, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allopontixanthobacter sediminis", "strain": "strain=KCTC 42453", "accession": "GCA_009828115.1", "taxid": 1689985, "species_taxid": 1689985, "relation_to_type": "type", "validated": true, "ani": 77.2992, "matched_fragments": 144, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Allopontixanthobacter confluentis", "strain": "strain=KCTC 52259", "accession": "GCA_009827615.1", "taxid": 1849021, "species_taxid": 1849021, "relation_to_type": "type", "validated": true, "ani": 77.2892, "matched_fragments": 214, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Parerythrobacter jejuensis", "strain": "strain=JCM 16677", "accession": "GCA_009827995.1", "taxid": 795812, "species_taxid": 795812, "relation_to_type": "type", "validated": true, "ani": 77.2684, "matched_fragments": 184, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Alteraurantiacibacter aestuarii", "strain": "strain=JCM 16339", "accession": "GCA_009827405.1", "taxid": 650004, "species_taxid": 650004, "relation_to_type": "type", "validated": true, "ani": 76.9641, "matched_fragments": 103, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania huizhouensis", "strain": "strain=YG19", "accession": "GCA_019711635.1", "taxid": 2867245, "species_taxid": 2867245, "relation_to_type": "type", "validated": true, "ani": 76.8401, "matched_fragments": 116, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania aerophila", "strain": "strain=GH25", "accession": "GCA_019711555.1", "taxid": 2867242, "species_taxid": 2867242, "relation_to_type": "type", "validated": true, "ani": 76.8325, "matched_fragments": 116, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania qiaonensis", "strain": "strain=6D47A", "accession": "GCA_019711515.1", "taxid": 2867240, "species_taxid": 2867240, "relation_to_type": "type", "validated": true, "ani": 76.8251, "matched_fragments": 112, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinithalassobacter portus", "strain": "strain=FM6", "accession": "GCA_003171655.1", "taxid": 2676234, "species_taxid": 2676234, "relation_to_type": "type", "validated": true, "ani": 76.7977, "matched_fragments": 65, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pelagerythrobacter marinus", "strain": "strain=H32", "accession": "GCA_009827515.1", "taxid": 538382, "species_taxid": 538382, "relation_to_type": "type", "validated": true, "ani": 76.7537, "matched_fragments": 113, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania pelagi", "strain": "strain=JCM 17468", "accession": "GCA_009827295.1", "taxid": 994320, "species_taxid": 994320, "relation_to_type": "type", "validated": true, "ani": 76.6352, "matched_fragments": 123, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Qipengyuania gelatinilytica", "strain": "strain=1NDH1", "accession": "GCA_019711315.1", "taxid": 2867231, "species_taxid": 2867231, "relation_to_type": "type", "validated": true, "ani": 76.6189, "matched_fragments": 127, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Altericroceibacterium indicum", "strain": "strain=DSM 18604", "accession": "GCA_009828105.1", "taxid": 374177, "species_taxid": 374177, "relation_to_type": "type", "validated": true, "ani": 76.5537, "matched_fragments": 96, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas suaedae", "strain": "strain=XS-10", "accession": "GCA_007833215.1", "taxid": 2599297, "species_taxid": 2599297, "relation_to_type": "type", "validated": true, "ani": 76.3364, "matched_fragments": 56, "total_fragments": 928, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingosinithalassobacter tenebrarum", "strain": "strain=zrk23", "accession": "GCA_011057975.1", "taxid": 2711215, "species_taxid": 2711215, 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