# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_54	LOCUS_00540	sequence01:56904..57086(+)	partial			WP_014206051.1	transketolase C-terminal domain-containing protein	100.0	18.0	91.7
MGA_60	LOCUS_00600	sequence01:66876..67343(-)	internal_stop_codon	67458..67460(-)		WP_014206057.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	100.0	51.2	93.5
MGA_61	LOCUS_00610	sequence01:67458..67880(-)	internal_stop_codon	67458..67460(-)		WP_014206057.1	SUMF1/EgtB/PvdO family nonheme iron enzyme	77.1	35.6	95.4
MGA_62	LOCUS_00620	sequence01:67877..69073(-)	partial			WP_014206058.1	arylsulfatase	63.8	47.0	78.2
MGA_145	LOCUS_01450	sequence01:157803..158390(+)	partial			WP_005068176.1	DUF2726 domain-containing protein	55.4	73.5	45.4
MGA_177	LOCUS_01770	sequence02:23507..24454(+)	partial			WP_001292317.1	glycosyltransferase family 2 protein	70.5	74.0	31.0
MGA_182	LOCUS_01820	sequence02:28553..29173(+)	partial			WP_003704933.1	NeuD/PglB/VioB family sugar acetyltransferase	94.7	47.2	60.5
MGA_201	LOCUS_02000	sequence02:54250..54687(+)	frameshift		54266	WP_014208072.1	GNAT family N-acetyltransferase	96.6	82.8	97.1
MGA_213	LOCUS_02120	sequence02:67478..67648(+)	internal_stop_codon	67646..67648(+)		WP_014208086.1	nuclear transport factor 2 family protein	96.4	43.2	94.4
MGA_214	LOCUS_02130	sequence02:67697..67855(+)	internal_stop_codon	67646..67648(+)		WP_014208086.1	nuclear transport factor 2 family protein	100.0	41.6	92.3
MGA_245	LOCUS_02440	sequence02:105386..105742(+)	frameshift,internal_stop_codon	105741..105743(+),105297..105299(+)	105269	WP_176682092.1	IS5-like element IS903B family transposase	89.8	32.3	49.1
MGA_247	LOCUS_02460	sequence02:106886..107254(+)	partial			WP_011073373.1	IS481-like element ISSod13 family transposase	93.4	32.9	75.4
MGA_248	LOCUS_02470	sequence02:107686..108123(+)	frameshift,internal_stop_codon	108122..108124(+)	107641	WP_002551322.1	IS21-like element ISPsy4 family transposase	99.3	42.4	61.8
MGA_249	LOCUS_02480	sequence02:108160..108333(+)	internal_stop_codon	108121..108123(+)		WP_002551322.1	IS21-like element ISPsy4 family transposase	93.0	15.6	54.7
MGA_250	LOCUS_02490	sequence02:108465..108767(+)	internal_stop_codon	108402..108404(+)		WP_005741073.1	IS21-like element ISPsy4 family helper ATPase IstB	88.0	32.7	54.5
MGA_251	LOCUS_02500	sequence02:109014..109697(+)	internal_stop_codon	108918..108920(+)		WP_011073613.1	IS5 family transposase	98.2	72.0	40.3
MGA_254	LOCUS_02530	sequence02:111074..112111(-)	partial			WP_002118952.1	L,D-transpeptidase	87.2	73.1	66.8
MGA_255	LOCUS_02540	sequence02:112240..112779(-)	partial			WP_010946555.1	IS4-like element ISLpn9 family transposase	86.0	42.1	53.2
MGA_256	LOCUS_02550	sequence02:112772..113290(-)	frameshift		113385	WP_086016632.1	IS1-like element ISYps7 family transposase	90.1	67.7	30.4
MGA_272	LOCUS_02710	sequence02:125203..125700(-)	partial			WP_003642476.1	GNAT family protein	75.8	66.7	27.2
MGA_337	LOCUS_03360	sequence03:15226..15978(-)	frameshift		15261	WP_014207746.1	30S ribosomal protein S3	90.0	84.9	100.0
MGA_471	LOCUS_04700	sequence04:1..4722(+)	partial			WP_014207470.1	Ig-like domain-containing protein	96.3	62.3	74.9
MGA_511	LOCUS_05100	sequence04:50499..50651(+)	partial			WP_014207440.1	transcription elongation factor GreB	98.0	29.9	98.0
MGA_520	LOCUS_05190	sequence04:62940..63212(-)	frameshift,internal_stop_codon	62975..62977(-),63035..63037(-),63209..63211(-)	63193,63043,62697,62833	WP_217968131.1	IS3 family transposase	57.8	13.8	59.6
MGA_525	LOCUS_05240	sequence04:70329..73097(-)	partial			WP_005477239.1	integrase family protein	72.9	83.4	23.4
MGA_527	LOCUS_05260	sequence04:74744..74866(+)	partial			WP_014207440.1	transcription elongation factor GreB	100.0	24.4	97.5
MGA_532	LOCUS_05310	sequence04:78821..79951(-)	partial			WP_011057303.1	DUF389 domain-containing protein	73.4	79.8	24.8
MGA_572	LOCUS_05710	sequence04:126228..126716(+)	partial			WP_014207402.1	DNA internalization-related competence protein ComEC/Rec2	94.4	18.9	90.2
MGA_579	LOCUS_05770	sequence05:3651..7622(-)	partial			WP_011104844.1	phage tail tape measure protein	56.5	67.3	28.8
MGA_608	LOCUS_06060	sequence05:25073..25474(-)	partial			WP_011705908.1	hypothetical protein	76.7	73.6	42.9
MGA_670	LOCUS_06680	sequence05:78417..78806(+)	partial			WP_010919964.1	PaaI family thioesterase	62.8	52.9	32.5
MGA_769	LOCUS_07670	sequence06:81976..82380(+)	partial			WP_005067892.1	glycosyltransferase	98.5	31.7	89.4
MGA_781	LOCUS_07790	sequence06:95174..95578(-)	partial			WP_014207352.1	hypothetical protein	94.8	58.5	98.4
MGA_886	LOCUS_08840	sequence08:19163..20473(-)	partial			WP_014207391.1	cell envelope integrity protein TolA	43.3	50.1	56.6
MGA_926	LOCUS_09240	sequence08:58492..58695(+)	partial			WP_002118955.1	NF038104 family lipoprotein	55.2	71.2	83.8
MGA_997	LOCUS_09940	sequence09:53202..53438(-)	partial			WP_014207184.1	PqiC family protein	88.5	38.3	89.9
MGA_1004	LOCUS_10010	sequence09:58905..59267(-)	partial			WP_005171734.1	virulence transcriptional regulator RovM	66.7	26.1	42.0
MGA_1008	LOCUS_10050	sequence09:62387..62692(-)	partial			WP_004530999.1	DMT family transporter	99.0	32.9	39.0
MGA_1021	LOCUS_10180	sequence10:408..1457(+)	partial			WP_011105447.1	DGQHR domain-containing protein	68.2	69.6	25.4
MGA_1058	LOCUS_10550	sequence10:39904..40098(+)	partial			WP_002116082.1	hypothetical protein	50.0	76.2	100.0
MGA_1113	LOCUS_11080	sequence11:48927..49103(+)	frameshift		49082	WP_014208223.1	tetratricopeptide repeat protein	94.8	12.6	92.7
MGA_1134	LOCUS_11290	sequence11:70680..72065(-)	partial			WP_014208234.1	AAA family ATPase	33.8	70.9	97.4
MGA_1189	LOCUS_11840	sequence11:139315..140247(+)	partial			WP_014208275.1	pseudouridine synthase	62.9	83.7	96.4
MGA_1203	LOCUS_11980	sequence11:155857..156105(-)	partial			WP_005455908.1	DUF2061 domain-containing protein	64.6	39.6	47.2
MGA_1209	LOCUS_12040	sequence11:160923..161150(+)	frameshift		161129	WP_002114916.1	lysozyme inhibitor LprI family protein	92.0	55.6	97.1
MGA_1325	LOCUS_13200	sequence11:290359..290763(+)	frameshift,internal_stop_codon	290105..290107(+)	290314,290221,290287	WP_003693486.1	tyrosine-type recombinase/integrase	67.9	23.7	42.9
MGA_1331	LOCUS_13260	sequence11:296171..296815(-)	partial			WP_014208382.1	DMT family transporter	100.0	69.5	96.3
MGA_1351	LOCUS_13460	sequence11:318575..318979(+)	partial			WP_002261916.1	helix-hairpin-helix domain-containing protein	60.4	34.2	45.7
MGA_1396	LOCUS_13910	sequence12:2807..3037(-)	partial			WP_014207661.1	hypothetical protein	76.3	74.4	89.7
MGA_1423	LOCUS_14180	sequence12:31017..31337(-)	partial			WP_010635605.1	membrane protein insertion efficiency factor YidD	61.3	84.1	68.1
MGA_1443	LOCUS_14380	sequence13:2574..3158(+)	partial			WP_010876526.1	tyrosine-type recombinase/integrase	83.5	49.2	35.4
MGA_1464	LOCUS_14590	sequence13:18934..19572(-)	partial			WP_014207064.1	lysozyme	68.9	76.8	51.4
MGA_1465	LOCUS_14600	sequence13:19572..19964(-)	partial			WP_002119864.1	hypothetical protein	69.2	69.8	71.1
MGA_1466	LOCUS_14610	sequence13:20057..20854(-)	partial			WP_002211786.1	hypothetical protein	77.4	38.5	51.7
MGA_1496	LOCUS_14910	sequence13:40707..41051(-)	partial			WP_002114889.1	Sec-independent protein translocase protein TatB	90.4	72.4	45.7
MGA_1503	LOCUS_14980	sequence13:46322..46570(-)	frameshift		46581	WP_004190237.1	diguanylate cyclase	87.8	23.2	37.5
MGA_1548	LOCUS_15410	sequence15:3818..4348(-)	frameshift		3862	WP_011074424.1	IS5-like element ISSod12 family transposase	91.5	51.5	42.1
MGA_1549	LOCUS_15420	sequence15:5094..5621(+)	partial			WP_011123196.1	helix-turn-helix domain-containing protein	84.6	55.4	37.3
MGA_1559	LOCUS_15520	sequence15:12927..13190(+)	internal_stop_codon	13188..13190(+)		WP_001067855.1	IS6-like element IS26 family transposase	100.0	37.2	89.7
MGA_1561	LOCUS_15540	sequence15:15557..17311(-)	partial			WP_000273909.1	AAA family ATPase	55.1	59.7	35.6
MGA_1570	LOCUS_15630	sequence15:29167..30081(-)	partial			WP_002219732.1	replication initiation protein RepM	59.9	55.0	51.6
MGA_1579	LOCUS_15720	sequence15:34502..35236(-)	partial			WP_096456326.1	hypothetical protein	32.0	28.2	42.3
MGA_1581	LOCUS_15740	sequence15:36596..37384(-)	partial			WP_004521783.1	OmpA family protein	43.5	47.9	33.9
MGA_1609	LOCUS_16020	sequence16:28370..28864(+)	partial			WP_005069871.1	translesion error-prone DNA polymerase V autoproteolytic subunit	84.8	71.4	61.4
MGA_1644	LOCUS_16370	sequence17:27392..28033(-)	internal_stop_codon	28034..28036(-)		WP_014207505.1	LysR family transcriptional regulator	100.0	72.4	96.7
MGA_1645	LOCUS_16380	sequence17:28034..28276(-)	internal_stop_codon	28034..28036(-)		WP_014207505.1	LysR family transcriptional regulator	100.0	27.2	100.0
MGA_1683	LOCUS_16750	sequence19:3340..4257(-)	partial			WP_000772672.1	integrase arm-type DNA-binding domain-containing protein	91.1	65.3	35.5
MGA_1722	LOCUS_17140	sequence20:8206..9057(-)	frameshift		9110	WP_086026417.1	IS3-like element ISVpa2 family transposase	91.5	69.5	44.7
MGA_1727	LOCUS_17190	sequence20:11176..11364(+)	partial			WP_045599895.1	type II toxin-antitoxin system RelE/ParE family toxin	95.2	53.6	61.0
MGA_1742	LOCUS_17340	sequence20:24050..24595(+)	frameshift		24511	WP_011268088.1	type II toxin-antitoxin system HipA family toxin	85.1	36.0	63.9
MGA_1743	LOCUS_17350	sequence20:25001..25315(+)	frameshift		24917	WP_011268088.1	type II toxin-antitoxin system HipA family toxin	94.2	22.5	53.1
MGA_1745	LOCUS_17370	sequence20:25847..26686(-)	partial			WP_009936075.1	alkaline phosphatase	89.6	50.1	50.4
MGA_1829	LOCUS_18210	sequence22:56963..57211(-)	partial			WP_014206567.1	hypothetical protein	42.7	76.1	100.0
MGA_1840	LOCUS_18320	sequence22:65474..65824(-)	partial			WP_014206556.1	hypothetical protein	100.0	60.4	100.0
MGA_1849	LOCUS_18410	sequence22:74827..75336(+)	frameshift		75327	WP_014206550.1	DMT family transporter	97.0	53.8	89.0
MGA_1851	LOCUS_18430	sequence22:75522..75755(+)	frameshift		75327	WP_014206550.1	DMT family transporter	100.0	25.2	94.8
MGA_1885	LOCUS_18770	sequence22:109115..109687(-)	partial			WP_151652833.1	AraC family transcriptional regulator	97.4	66.7	33.7
MGA_1946	LOCUS_19380	sequence22:172380..172742(+)	partial			WP_013225580.1	cyclophilin-like fold protein	82.5	66.4	46.5
MGA_1955	LOCUS_19470	sequence22:182681..184030(-)	partial			WP_014206463.1	KGG domain-containing protein	13.8	75.6	96.8
MGA_1966	LOCUS_19580	sequence22:193860..194774(+)	partial			WP_014206455.1	SGNH/GDSL hydrolase family protein	99.3	73.3	94.4
MGA_1967	LOCUS_19590	sequence22:194910..195104(-)	partial			WP_005802478.1	MFS transporter	82.8	11.8	100.0
MGA_1968	LOCUS_19600	sequence22:195046..197019(-)	partial			WP_014206848.1	DUF637 domain-containing protein	97.6	30.9	77.4
MGA_1997	LOCUS_19890	sequence22:222496..223347(+)	internal_stop_codon	222403..222405(+)		WP_014206285.1	MerR family transcriptional regulator	100.0	82.7	95.1
MGA_2004	LOCUS_19960	sequence22:229280..229510(-)	partial			WP_014206278.1	TetR/AcrR family transcriptional regulator	97.4	39.6	79.7
MGA_2015	LOCUS_20070	sequence22:237811..237963(+)	partial			WP_014206273.1	hypothetical protein	66.0	66.0	97.0
MGA_2047	LOCUS_20390	sequence22:271251..271487(+)	partial			WP_014206246.1	hypothetical protein	97.4	63.3	93.4
MGA_2055	LOCUS_20470	sequence22:277500..278219(-)	partial			WP_011021737.1	class I SAM-dependent methyltransferase	69.5	72.0	26.7
MGA_2058	LOCUS_20500	sequence22:279954..280628(+)	partial			WP_000588494.1	HAD family hydrolase	84.8	74.9	41.9
MGA_2099	LOCUS_20910	sequence23:182..1381(-)	partial			WP_150625464.1	tyrosine-type recombinase/integrase	99.0	65.8	34.9
MGA_2117	LOCUS_21090	sequence23:18136..18633(+)	frameshift,internal_stop_codon	18127..18129(+),17924..17926(+)	18107,18037	WP_010947046.1	IS5 family transposase	97.0	65.5	60.1
MGA_2120	LOCUS_21120	sequence23:21178..21858(-)	partial			WP_015703290.1	LysR family transcriptional regulator	88.9	68.8	29.3
MGA_2144	LOCUS_21350	sequence25:6850..7761(+)	partial			WP_013225255.1	alpha/beta hydrolase	38.3	38.6	29.7
MGA_2145	LOCUS_21360	sequence25:7825..8757(+)	partial			WP_011027106.1	alpha/beta hydrolase	32.6	36.0	35.6
MGA_2150	LOCUS_21410	sequence26:20..673(-)	partial			WP_011057696.1	GGDEF domain-containing phosphodiesterase	70.5	21.5	31.0
MGA_2156	LOCUS_21470	sequence26:5704..6393(-)	partial			WP_034050559.1	cardiolipin synthase	48.5	23.3	84.7
MGA_2186	LOCUS_21740	sequence32:779..1234(-)	partial			WP_001067858.1	IS6-like element IS26 family transposase	98.7	63.7	80.5
MGA_2188	LOCUS_21760	sequence32:2036..2539(+)	partial			WP_000336721.1	IS3 family transposase	99.4	61.0	53.6
MGA_2244	LOCUS_22320	sequence33:56313..56729(+)	frameshift		56705	WP_014207984.1	D-Ala-D-Ala carboxypeptidase family metallohydrolase	94.9	58.0	84.0
MGA_2245	LOCUS_22330	sequence33:56705..56998(+)	frameshift		56705	WP_014207984.1	D-Ala-D-Ala carboxypeptidase family metallohydrolase	96.9	41.6	100.0
MGA_2296	LOCUS_22840	sequence33:112201..112521(-)	internal_stop_codon	112639..112641(-)		WP_014207949.1	haloacid dehalogenase-like hydrolase	100.0	48.6	87.7
MGA_2297	LOCUS_22850	sequence33:112639..112857(-)	internal_stop_codon	112639..112641(-)		WP_014207949.1	haloacid dehalogenase-like hydrolase	100.0	33.0	93.1
MGA_2399	LOCUS_23870	sequence33:224956..225318(+)	partial			WP_014207953.1	type VI secretion system Vgr family protein	85.0	9.3	33.7
MGA_2439	LOCUS_24270	sequence33:262914..263264(-)	frameshift		262952,262747	WP_014207850.1	hypothetical protein	97.4	49.1	77.9
MGA_2455	LOCUS_24430	sequence35:239..1138(-)	partial			WP_003429292.1	nucleoid occlusion protein	69.9	75.9	33.0
MGA_2469	LOCUS_24530	sequence42:399..962(+)	partial			WP_011071273.1	IS982-like element ISSod20 family transposase	97.3	62.0	38.5
MGA_2470	LOCUS_24540	sequence43:87..491(+)	frameshift		467	WP_224783972.1	IS5 family transposase	91.8	44.9	41.1
MGA_2521	LOCUS_25050	sequence44:57865..58377(+)	partial			WP_014207097.1	RNA chaperone Hfq	41.2	40.2	100.0
MGA_2608	LOCUS_25920	sequence44:143975..144736(+)	partial			WP_014207025.1	spore coat U domain-containing protein	100.0	74.0	89.7
MGA_2684	LOCUS_26680	sequence44:225425..225883(+)	partial			WP_014206974.1	S8 family peptidase	99.3	38.5	96.7
MGA_2705	LOCUS_26780	sequence55:3651..7577(-)	partial			WP_011104844.1	phage tail tape measure protein	48.7	63.0	25.6
MGA_2708	LOCUS_26810	sequence55:8555..9094(-)	partial			WP_000203831.1	phage antirepressor Ant	59.2	50.9	53.7
MGA_2715	LOCUS_26880	sequence55:12381..13535(-)	partial			WP_011962649.1	hypothetical protein	78.4	65.0	34.9
MGA_2725	LOCUS_26980	sequence55:20742..21251(-)	partial			WP_005693952.1	terminase small subunit	55.6	55.6	50.5
MGA_2731	LOCUS_27040	sequence55:23029..23820(-)	partial			WP_011962649.1	hypothetical protein	51.3	31.1	38.5
MGA_2897	LOCUS_28700	sequence55:187910..188929(+)	partial			WP_000558370.1	glycosyltransferase	74.6	38.9	39.0
MGA_2908	LOCUS_28810	sequence55:200077..201009(-)	partial			WP_014207643.1	HAMP domain-containing sensor histidine kinase	100.0	73.3	95.8
MGA_3000	LOCUS_29600	sequence66:82050..82556(+)	frameshift		81955	WP_014205919.1	DUF2062 domain-containing protein	100.0	82.8	99.4
MGA_3019	LOCUS_29790	sequence66:99926..100396(-)	partial			WP_011707013.1	cold shock domain-containing protein	42.9	30.4	46.3
MGA_3051	LOCUS_30110	sequence66:135944..136225(-)	frameshift		135946	WP_005111779.1	TetR/AcrR family transcriptional regulator	76.3	33.0	54.9
MGA_3227	LOCUS_31790	sequence76:112934..113230(-)	partial			WP_011087865.1	helix-turn-helix domain-containing protein	92.9	65.0	59.3
MGA_3275	LOCUS_32270	sequence76:162611..162823(+)	internal_stop_codon	162590..162592(+)		WP_002113703.1	hypothetical protein	98.6	68.3	87.0
MGA_3287	LOCUS_32390	sequence76:175619..176503(+)	partial			WP_001881266.1	phage/plasmid replication protein, II/X family	87.1	51.9	30.8
MGA_3293	LOCUS_32440	sequence76:180162..181397(+)	partial			WP_001881266.1	phage/plasmid replication protein, II/X family	84.2	68.6	32.8
MGA_3311	LOCUS_32610	sequence76:197604..198218(+)	partial			WP_014206866.1	hypothetical protein	67.2	68.5	30.8
MGA_3322	LOCUS_32630	sequence86:371..772(+)	partial			WP_000676657.1	DoxX-like family protein	80.5	35.8	29.6
MGA_3371	LOCUS_33120	sequence86:49150..49371(+)	frameshift		49347	WP_014207215.1	hypothetical protein	90.4	31.7	95.5
MGA_3372	LOCUS_33130	sequence86:49431..49775(+)	frameshift		49347	WP_014207215.1	hypothetical protein	100.0	54.8	94.7
MGA_3406	LOCUS_33470	sequence86:86468..87022(-)	partial			WP_014207064.1	lysozyme	77.2	74.7	64.1
MGA_3419	LOCUS_33600	sequence86:96938..97696(-)	partial			WP_015039652.1	site-specific integrase	76.6	59.0	42.8
MGA_3502	LOCUS_34430	sequence86:197596..197790(-)	partial			WP_014208467.1	TetR/AcrR family transcriptional regulator	92.2	27.6	78.0
MGA_3575	LOCUS_35150	sequence88:72578..73066(+)	internal_stop_codon	73064..73066(+)		WP_014206926.1	right-handed parallel beta-helix repeat-containing protein	100.0	33.5	98.1
MGA_3576	LOCUS_35160	sequence88:73106..74029(+)	internal_stop_codon	73064..73066(+)		WP_014206926.1	right-handed parallel beta-helix repeat-containing protein	98.0	62.2	97.3
MGA_3632	LOCUS_35720	sequence88:134097..134318(+)	frameshift		134080	WP_014206885.1	saccharopine dehydrogenase NADP-binding domain-containing protein	76.7	15.8	85.7
MGA_3636	LOCUS_35760	sequence88:136403..137404(-)	internal_stop_codon	137414..137416(-)		WP_014206882.1	FAD-dependent oxidoreductase	100.0	83.0	91.6
MGA_3637	LOCUS_35770	sequence88:137414..137608(-)	internal_stop_codon	137414..137416(-)		WP_014206882.1	FAD-dependent oxidoreductase	100.0	16.0	96.9
MGA_3658	LOCUS_35980	sequence88:155226..155549(-)	partial			WP_013097792.1	DoxX family protein	99.1	65.0	45.3
MGA_3663	LOCUS_36030	sequence88:158666..159013(+)	partial			WP_014206849.1	ShlB/FhaC/HecB family hemolysin secretion/activation protein	88.7	17.6	79.4
MGA_3675	LOCUS_36150	sequence88:174350..175897(-)	partial			WP_010970442.1	tyrosinase family protein	64.3	37.6	24.1