{ "type": "genome", "identifier": "GCF_013149805.1", "organism": "Isoptericola chiayiensis", "title": "Isoptericola chiayiensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_013149805.1", "bioproject": "PRJNA224116", "biosample": "SAMN14505434", "wgs_master": "JABEZT000000000.1", "refseq_category": "reference genome", "taxid": "579446", "species_taxid": "579446", "organism_name": "Isoptericola chiayiensis", "infraspecific_name": "strain=KCTC 19740", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/05/22", "asm_name": "ASM1314980v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_013149805.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/149/805/GCF_013149805.1_ASM1314980v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3616226", "genome_size_ungapped": "3615936", "gc_percent": "73.000000", "replicon_count": "0", "scaffold_count": "16", "contig_count": "16", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_013149805.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "3339", "protein_coding_gene_count": "3265", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-05-22", "dateModified": "2020-05-22", "datePublished": "2020-05-22", "_annotation": { "sample_count": 1, "sample_organism": [ "Isoptericola chiayiensis" ], "sample_taxid": [ "579446" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Promicromonospora citrea", "strain": "strain=ATCC 15908", "accession": "GCA_013004695.1", "taxid": 43677, "species_taxid": 43677, "relation_to_type": "type", "validated": true, "ani": 79.8947, "matched_fragments": 615, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Promicromonospora kroppenstedtii", "strain": "strain=DSM 19349", "accession": "GCA_000515355.1", "taxid": 440482, "species_taxid": 440482, "relation_to_type": "type", "validated": true, "ani": 79.5862, "matched_fragments": 628, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Promicromonospora sukumoe", "strain": "strain=DSM 44121", "accession": "GCA_014137995.1", "taxid": 88382, "species_taxid": 88382, "relation_to_type": "type", "validated": true, "ani": 79.5752, "matched_fragments": 704, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulosimicrobium marinum", "strain": "strain=NBRC 110994", "accession": "GCA_020551945.1", "taxid": 1638992, "species_taxid": 1638992, "relation_to_type": "type", "validated": true, "ani": 79.5637, "matched_fragments": 639, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulosimicrobium arenosum", "strain": "strain=KCTC 49039", "accession": "GCA_014837295.1", "taxid": 2708133, "species_taxid": 2708133, "relation_to_type": "type", "validated": true, "ani": 79.4872, "matched_fragments": 590, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Promicromonospora umidemergens", "strain": "strain=DSM 22081", "accession": "GCA_024171995.1", "taxid": 629679, "species_taxid": 629679, "relation_to_type": "type", "validated": true, "ani": 79.2246, "matched_fragments": 624, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Myceligenerans indicum", "strain": "strain=I2", "accession": "GCA_016742955.1", "taxid": 2593663, "species_taxid": 2593663, "relation_to_type": "type", "validated": true, "ani": 79.1661, "matched_fragments": 556, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oerskovia enterophila", "strain": "strain=DSM 43852", "accession": "GCA_001692445.1", "taxid": 43678, "species_taxid": 43678, "relation_to_type": "type", "validated": true, "ani": 79.1247, "matched_fragments": 547, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oerskovia jenensis", "strain": "strain=DSM 46000", "accession": "GCA_016907235.1", "taxid": 162169, "species_taxid": 162169, "relation_to_type": "type", "validated": true, "ani": 78.9335, "matched_fragments": 558, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Oerskovia rustica", "strain": "strain=Sa4CUA1", "accession": "GCA_014836555.1", "taxid": 2762237, "species_taxid": 2762237, "relation_to_type": "type", "validated": true, "ani": 78.8828, "matched_fragments": 577, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas palmilytica", "strain": "strain=EW123", "accession": "GCA_021590045.1", "taxid": 2608402, "species_taxid": 2608402, "relation_to_type": "type", "validated": true, "ani": 78.7368, "matched_fragments": 507, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Actinotalea solisilvae", "strain": "strain=KACC 19191", "accession": "GCA_016464425.1", "taxid": 2072922, "species_taxid": 2072922, "relation_to_type": "type", "validated": true, "ani": 78.407, "matched_fragments": 504, "total_fragments": 1196, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellulomonas avistercoris", "strain": "strain=Sa3CUA2", "accession": "GCA_014836445.1", "taxid": 2762242, "species_taxid": 2762242, 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