{ "type": "genome", "identifier": "GCF_013155395.1", "organism": "Komagataeibacter melomenusus", "title": "Komagataeibacter melomenusus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "University of Maribor, Faculty of Natural Sciences and Mathematics", "publication": [ {} ], "properties": { "assembly_accession": "GCF_013155395.1", "bioproject": "PRJNA224116", "biosample": "SAMN14913413", "wgs_master": "JABJWC000000000.1", "refseq_category": "reference genome", "taxid": "2766578", "species_taxid": "2766578", "organism_name": "Komagataeibacter melomenusus", "infraspecific_name": "strain=AV436", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/05/24", "asm_name": "ASM1315539v1", "asm_submitter": "University of Maribor, Faculty of Natural Sciences and Mathematics", "gbrs_paired_asm": "GCA_013155395.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/155/395/GCF_013155395.1_ASM1315539v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3639526", "genome_size_ungapped": "3639526", "gc_percent": "63.000000", "replicon_count": "0", "scaffold_count": "146", "contig_count": "146", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_013155395.1-RS_2024_12_16", "annotation_date": "2024-12-16", "total_gene_count": "3534", "protein_coding_gene_count": "3363", "non_coding_gene_count": "57", "pubmed_id": "32756518" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-05-24", "dateModified": "2020-05-24", "datePublished": "2020-05-24", "_annotation": { "sample_count": 1, "sample_organism": [ "Komagataeibacter melomenusus" ], "sample_taxid": [ "2766578" ], "sample_host_organism": [], 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95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_013155395.1", "gtdb_species": "s__Komagataeibacter melomenusus", "ani": 100.0, "matched_fragments": 1146, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Komagataeibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.98", "min_intra_species_ani": "99.98", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_004302915.1", "gtdb_species": "s__Komagataeibacter xylinus_C", "ani": 93.0346, "matched_fragments": 921, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Komagataeibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": 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"min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_009834365.1", "gtdb_species": "s__Komagataeibacter xylinus_D", "ani": 92.5689, "matched_fragments": 936, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Komagataeibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003207795.1", "gtdb_species": "s__Komagataeibacter nataicola", "ani": 92.3944, "matched_fragments": 891, "total_fragments": 1151, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Acetobacterales;f__Acetobacteraceae;g__Komagataeibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.90", 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"\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }