{
    "type": "genome",
    "identifier": "GCF_013184495.1",
    "organism": "Sporosarcina jiandibaonis",
    "title": "Sporosarcina jiandibaonis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Institute of Agricultural Resources and Regional Planning, Chinese Academyof Agricultural Sciences",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_013184495.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN14299683",
        "wgs_master": "JAAOIY000000000.1",
        "refseq_category": "reference genome",
        "taxid": "2715535",
        "species_taxid": "2715535",
        "organism_name": "Sporosarcina jiandibaonis",
        "infraspecific_name": "strain=LAM9210",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Contig",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/05/28",
        "asm_name": "ASM1318449v1",
        "asm_submitter": "Institute of Agricultural Resources and Regional Planning, Chinese Academyof Agricultural Sciences",
        "gbrs_paired_asm": "GCA_013184495.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/184/495/GCF_013184495.1_ASM1318449v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "3630029",
        "genome_size_ungapped": "3630029",
        "gc_percent": "40.000000",
        "replicon_count": "0",
        "scaffold_count": "25",
        "contig_count": "25",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_013184495.1-RS_2024_05_05",
        "annotation_date": "2024-05-05",
        "total_gene_count": "3687",
        "protein_coding_gene_count": "3560",
        "non_coding_gene_count": "100",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-05-28",
    "dateModified": "2020-05-28",
    "datePublished": "2020-05-28",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Sporosarcina jiandibaonis"
        ],
        "sample_taxid": [
            "2715535"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China: Shandong Province"
        ],
        "sample_host_location_id": [],
        "data_size": "1.032 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 0.0,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3630029",
        "Number of Sequences": "25",
        "Longest Sequences (bp)": "1425971",
        "N50 (bp)": "486258",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "40.1",
        "Number of CDSs": "3623",
        "Average Protein Length": "292.3",
        "Coding Ratio (%)": "87.5",
        "Number of rRNAs": "6",
        "Number of tRNAs": "67",
        "Number of CRISPRs": "0"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Sporosarcina jiandibaonis",
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            },
            {
                "organism_name": "Sporosarcina ureilytica",
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                "taxid": 298596,
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                "relation_to_type": "type",
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
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                "status": "below_threshold"
            },
            {
                "organism_name": "Filibacter tadaridae",
                "strain": "",
                "accession": "GCA_900609045.1",
                "taxid": 2483811,
                "species_taxid": 2483811,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Sporosarcina gallistercoris",
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                "species_taxid": 2762245,
                "relation_to_type": "type",
                "validated": true,
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                "matched_fragments": 64,
                "total_fragments": 1199,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Psychrobacillus glaciei",
                "strain": "strain=PB01",
                "accession": "GCA_008973485.1",
                "taxid": 2283160,
                "species_taxid": 2283160,
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                "validated": true,
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                "matched_fragments": 80,
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                "status": "below_threshold"
            },
            {
                "organism_name": "Sporosarcina quadrami",
                "strain": "strain=Sa2YVA2",
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                "species_taxid": 2762234,
                "relation_to_type": "type",
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                "ani": 76.3766,
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                "total_fragments": 1199,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Planococcus ruber",
                "strain": "strain=CGMCC 1.19134",
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                "ani_threshold": 95,
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            },
            {
                "organism_name": "Psychrobacillus psychrotolerans",
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                "accession": "GCA_900115805.1",
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                "species_taxid": 126156,
                "relation_to_type": "type",
                "validated": true,
                "ani": 76.1219,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Paenisporosarcina antarctica",
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                "mean_intra_species_ani": "N/A",
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}