{ "type": "genome", "identifier": "GCF_013201075.1", "organism": "Lichenicola cladoniae", "title": "Lichenicola cladoniae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Korea Polar Research institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_013201075.1", "bioproject": "PRJNA224116", "biosample": "SAMN14917828", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1484109", "species_taxid": "1484109", "organism_name": "Lichenicola cladoniae", "infraspecific_name": "strain=PAMC 26569", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/05/31", "asm_name": "ASM1320107v1", "asm_submitter": "Korea Polar Research institute", "gbrs_paired_asm": "GCA_013201075.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/201/075/GCF_013201075.1_ASM1320107v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6061304", "genome_size_ungapped": "6061304", "gc_percent": "64.500000", "replicon_count": "8", "scaffold_count": "8", "contig_count": "8", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_013201075.1-RS_2024_12_16", "annotation_date": "2024-12-16", "total_gene_count": "5724", "protein_coding_gene_count": "5444", "non_coding_gene_count": "63", "pubmed_id": "25001073" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-05-31", "dateModified": "2020-05-31", "datePublished": "2020-05-31", "_annotation": { "sample_count": 1, "sample_organism": [ "Lichenicola cladoniae" ], "sample_taxid": [ "1484109" ], "sample_host_organism": [ "Cladonia borealis" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gluconacetobacter dulcium", "strain": "strain=LMG 1728", "accession": "GCA_014174165.1", "taxid": 2729096, "species_taxid": 2729096, "relation_to_type": "type", "validated": true, "ani": 78.0034, "matched_fragments": 308, "total_fragments": 2016, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gluconacetobacter diazotrophicus", "strain": "strain=LMG 7603", "accession": "GCA_014174315.1", "taxid": 33996, "species_taxid": 33996, "relation_to_type": "type", "validated": true, "ani": 77.9845, "matched_fragments": 333, "total_fragments": 2016, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gluconacetobacter liquefaciens", "strain": "strain=LMG 1382", "accession": "GCA_014174285.1", "taxid": 89584, "species_taxid": 89584, "relation_to_type": "type", "validated": true, "ani": 77.9524, "matched_fragments": 289, "total_fragments": 2016, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gluconacetobacter liquefaciens", "strain": "strain=DSM 5603", "accession": "GCA_003350405.1", "taxid": 89584, "species_taxid": 89584, "relation_to_type": "type", "validated": true, "ani": 77.9375, "matched_fragments": 291, "total_fragments": 2016, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gluconacetobacter liquefaciens", "strain": "strain=NBRC 12388", "accession": "GCA_006539085.1", "taxid": 89584, "species_taxid": 89584, "relation_to_type": "type", "validated": true, "ani": 77.9039, "matched_fragments": 290, "total_fragments": 2016, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Roseomonas cervicalis", "strain": "strain=ATCC 49957", "accession": "GCA_000164635.1", "taxid": 204525, "species_taxid": 204525, "relation_to_type": "type", "validated": true, "ani": 77.4742, "matched_fragments": 292, "total_fragments": 2016, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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