{ "type": "genome", "identifier": "GCF_013328205.1", "organism": "Sphingomonas hominis", "title": "Sphingomonas hominis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Hohai University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_013328205.1", "bioproject": "PRJNA224116", "biosample": "SAMN15080057", "wgs_master": "JABULH000000000.1", "refseq_category": "reference genome", "taxid": "2741495", "species_taxid": "2741495", "organism_name": "Sphingomonas hominis", "infraspecific_name": "strain=HHU CXW", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/06/10", "asm_name": "ASM1332820v1", "asm_submitter": "Hohai University", "gbrs_paired_asm": "GCA_013328205.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/328/205/GCF_013328205.1_ASM1332820v1", "excluded_from_refseq": "na", 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Nanjing" ], "sample_host_location_id": [], "data_size": "0.972 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3558103", "Number of Sequences": "36", "Longest Sequences (bp)": "1024905", "N50 (bp)": "393935", "Gap Ratio (%)": "0.002810", "GCcontent (%)": "67.1", "Number of CDSs": "3445", "Average Protein Length": "308.1", "Coding Ratio (%)": "89.5", "Number of rRNAs": "3", "Number of tRNAs": "51", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Sphingomonas hominis", "strain": "strain=HHU CXW", "accession": "GCA_013328205.1", "taxid": 2741495, "species_taxid": 2741495, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1166, "total_fragments": 1168, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Sphingomonas citricola", "strain": "strain=RHCKR47", "accession": "GCA_019429535.1", "taxid": 2862498, "species_taxid": 2862498, "relation_to_type": "type", "validated": true, "ani": 87.5432, "matched_fragments": 841, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas palmae", "strain": "strain=JS21-1", "accession": "GCA_900109565.1", "taxid": 1855283, "species_taxid": 1855283, "relation_to_type": "type", "validated": true, "ani": 86.594, "matched_fragments": 844, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas adhaesiva", "strain": "strain=NBRC 15099", "accession": "GCA_001592345.1", "taxid": 28212, "species_taxid": 28212, "relation_to_type": "type", "validated": true, "ani": 81.8587, "matched_fragments": 593, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas citri", "strain": "strain=RRHST34", "accession": "GCA_019429485.1", "taxid": 2862499, "species_taxid": 2862499, "relation_to_type": "type", "validated": true, "ani": 81.649, "matched_fragments": 719, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas folli", "strain": "strain=RHCKR7", "accession": "GCA_019429525.1", "taxid": 2862497, "species_taxid": 2862497, "relation_to_type": "type", "validated": true, "ani": 81.6031, "matched_fragments": 700, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas endophytica", "strain": "strain=DSM 101535", "accession": "GCA_014199415.1", "taxid": 869719, "species_taxid": 869719, "relation_to_type": "type", "validated": true, "ani": 81.4745, "matched_fragments": 650, "total_fragments": 1168, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas corticis", "strain": 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