{ "type": "genome", "identifier": "GCF_013359885.1", "organism": "Curtobacterium luteum", "title": "Curtobacterium luteum", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Indigo Agriculture", "publication": [ {} ], "properties": { "assembly_accession": "GCF_013359885.1", "bioproject": "PRJNA224116", "biosample": "SAMN14931885", "wgs_master": "JABMCD000000000.1", "refseq_category": "na", "taxid": "33881", "species_taxid": "33881", "organism_name": "Curtobacterium luteum", "infraspecific_name": "strain=ATCC 15830", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/06/18", "asm_name": "ASM1335988v1", "asm_submitter": "Indigo Agriculture", "gbrs_paired_asm": "GCA_013359885.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/359/885/GCF_013359885.1_ASM1335988v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3703208", "genome_size_ungapped": "3703208", "gc_percent": "72.000000", "replicon_count": "0", "scaffold_count": "75", "contig_count": "75", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_013359885.1-RS_2024_09_08", "annotation_date": "2024-09-08", "total_gene_count": "3538", "protein_coding_gene_count": "3410", "non_coding_gene_count": "58", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-06-18", "dateModified": "2020-06-18", "datePublished": "2020-06-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Curtobacterium luteum" ], "sample_taxid": [ "33881" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Missing" ], 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"strain": "strain=JCM 1345", "accession": "GCA_014646735.1", "taxid": 2036, "species_taxid": 2036, "relation_to_type": "type", "validated": true, "ani": 85.8817, "matched_fragments": 902, "total_fragments": 1209, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium albidum", "strain": "strain=DSM 20512", "accession": "GCA_013359825.1", "taxid": 50728, "species_taxid": 50728, "relation_to_type": "type", "validated": true, "ani": 85.8534, "matched_fragments": 874, "total_fragments": 1209, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium pusillum", "strain": "strain=ATCC 19096", "accession": "GCA_013359865.1", "taxid": 69373, "species_taxid": 69373, "relation_to_type": "suspected-type", "validated": true, "ani": 85.7613, "matched_fragments": 867, "total_fragments": 1209, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium flaccumfaciens", "strain": "strain=LMG3645", "accession": "GCA_024997845.1", "taxid": 2035, "species_taxid": 2035, "relation_to_type": "suspected-type", "validated": true, "ani": 85.1663, "matched_fragments": 919, "total_fragments": 1209, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium allii", "strain": "strain=20TX0166", "accession": "GCA_021271025.1", "taxid": 2878384, "species_taxid": 2878384, "relation_to_type": "type", "validated": true, "ani": 85.1463, "matched_fragments": 902, "total_fragments": 1209, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium herbarum", "strain": "strain=LMG19917T", "accession": "GCA_025000405.1", "taxid": 150122, "species_taxid": 150122, "relation_to_type": "suspected-type", "validated": true, "ani": 84.1488, "matched_fragments": 796, "total_fragments": 1209, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Curtobacterium herbarum", "strain": "strain=DSM 14013", "accession": "GCA_016907335.1", "taxid": 150122, 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