{
    "type": "genome",
    "identifier": "GCF_013391105.1",
    "organism": "Natronomonas salina",
    "title": "Natronomonas salina",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "Jiangsu University",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_013391105.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN15354321",
        "wgs_master": "na",
        "refseq_category": "reference genome",
        "taxid": "1710540",
        "species_taxid": "1710540",
        "organism_name": "Natronomonas salina",
        "infraspecific_name": "strain=YPL13",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Complete Genome",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/07/07",
        "asm_name": "ASM1339110v1",
        "asm_submitter": "Jiangsu University",
        "gbrs_paired_asm": "GCA_013391105.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/391/105/GCF_013391105.1_ASM1339110v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "archaea",
        "genome_size": "3746575",
        "genome_size_ungapped": "3746575",
        "gc_percent": "67.500000",
        "replicon_count": "1",
        "scaffold_count": "1",
        "contig_count": "1",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_013391105.1-RS_2024_05_05",
        "annotation_date": "2024-05-05",
        "total_gene_count": "3946",
        "protein_coding_gene_count": "3864",
        "non_coding_gene_count": "50",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-07-07",
    "dateModified": "2020-07-07",
    "datePublished": "2020-07-07",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Natronomonas salina"
        ],
        "sample_taxid": [
            "1710540"
        ],
        "sample_host_organism": [],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "China:Yunnan"
        ],
        "sample_host_location_id": [],
        "data_size": "1.011 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 95.83,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "3746575",
        "Number of Sequences": "1",
        "Longest Sequences (bp)": "3746575",
        "N50 (bp)": "3746575",
        "Gap Ratio (%)": "0.000000",
        "GCcontent (%)": "67.5",
        "Number of CDSs": "3899",
        "Average Protein Length": "276.7",
        "Coding Ratio (%)": "86.4",
        "Number of rRNAs": "3",
        "Number of tRNAs": "50",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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            {
                "organism_name": "Natronomonas salina",
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                "accession": "GCA_013391105.1",
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                "species_taxid": 1710540,
                "relation_to_type": "type",
                "validated": true,
                "ani": 100.0,
                "matched_fragments": 1248,
                "total_fragments": 1248,
                "ani_threshold": 95,
                "status": "conclusive"
            },
            {
                "organism_name": "Natronomonas halophila",
                "strain": "strain=C90",
                "accession": "GCA_013391085.1",
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                "species_taxid": 2747817,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.4281,
                "matched_fragments": 639,
                "total_fragments": 1248,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Natronomonas gomsonensis",
                "strain": "strain=KCTC 4088",
                "accession": "GCA_024300825.1",
                "taxid": 1046043,
                "species_taxid": 1046043,
                "relation_to_type": "type",
                "validated": true,
                "ani": 81.2095,
                "matched_fragments": 653,
                "total_fragments": 1248,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Natronomonas moolapensis",
                "strain": "strain=8.8.11",
                "accession": "GCA_000591055.1",
                "taxid": 416273,
                "species_taxid": 416273,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.6563,
                "matched_fragments": 445,
                "total_fragments": 1248,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Natronomonas pharaonis",
                "strain": "strain=Gabara",
                "accession": "GCA_000026045.1",
                "taxid": 2257,
                "species_taxid": 2257,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.5989,
                "matched_fragments": 422,
                "total_fragments": 1248,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Natronomonas salsuginis",
                "strain": "strain=F20-122",
                "accession": "GCA_005239135.1",
                "taxid": 2217661,
                "species_taxid": 2217661,
                "relation_to_type": "type",
                "validated": true,
                "ani": 79.3831,
                "matched_fragments": 446,
                "total_fragments": 1248,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Salinirubellus salinus",
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                "accession": "GCA_025231485.1",
                "taxid": 1364945,
                "species_taxid": 1364945,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.6968,
                "matched_fragments": 523,
                "total_fragments": 1248,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halosimplex rubrum",
                "strain": "strain=R27",
                "accession": "GCA_013415885.1",
                "taxid": 869889,
                "species_taxid": 869889,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.5275,
                "matched_fragments": 516,
                "total_fragments": 1248,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Halosimplex salinum",
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                "accession": "GCA_003730195.1",
                "taxid": 1710538,
                "species_taxid": 1710538,
                "relation_to_type": "type",
                "validated": true,
                "ani": 78.2751,
                "matched_fragments": 522,
                "total_fragments": 1248,
                "ani_threshold": 95,
                "status": "below_threshold"
            }
        ],
        "cc_result": {
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            "contamination": 4.17,
            "strain_heterogeneity": 0.0
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas",
                "ani_circumscription_radius": 95.0,
                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
                "mean_intra_species_af": "N/A",
                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
                "status": "-"
            },
            {
                "accession": "GCF_013391635.1",
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas",
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                "mean_intra_species_ani": "N/A",
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                "min_intra_species_af": "N/A",
                "num_clustered_genomes": 1,
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            },
            {
                "accession": "GCF_009741925.1",
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                "gtdb_taxonomy": "d__Archaea;p__Halobacteriota;c__Halobacteria;o__Halobacteriales;f__Haloarculaceae;g__Natronomonas",
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                "mean_intra_species_ani": "N/A",
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            },
            {
                "accession": "GCA_003021325.1",
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            },
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            },
            {
                "accession": "GCA_007135435.1",
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    "_bac2feature": {
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    "_genome_taxon": [
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    "quality": 5,
    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}