{ "type": "genome", "identifier": "GCF_013408335.1", "organism": "Nocardioides panzhihuensis", "title": "Nocardioides panzhihuensis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_013408335.1", "bioproject": "PRJNA224116", "biosample": "SAMN05878199", "wgs_master": "JACBZR000000000.1", "refseq_category": "reference genome", "taxid": "860243", "species_taxid": "860243", "organism_name": "Nocardioides panzhihuensis", "infraspecific_name": "strain=DSM 26487", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/13", "asm_name": "ASM1340833v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_013408335.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/408/335/GCF_013408335.1_ASM1340833v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6307769", "genome_size_ungapped": "6307769", "gc_percent": "69.000000", "replicon_count": "0", "scaffold_count": "3", "contig_count": "3", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_013408335.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "6029", "protein_coding_gene_count": "5941", "non_coding_gene_count": "57", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-13", "dateModified": "2020-07-13", "datePublished": "2020-07-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Nocardioides panzhihuensis" ], "sample_taxid": [ "860243" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Nocardioides nematodiphilus", "strain": "strain=R-N-C8", "accession": "GCA_020216525.1", "taxid": 2849669, "species_taxid": 2849669, "relation_to_type": "type", "validated": true, "ani": 80.0379, "matched_fragments": 638, "total_fragments": 2101, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides deserti", "strain": "strain=CGMCC 4.7183", "accession": "GCA_014646035.1", "taxid": 1588644, "species_taxid": 1588644, "relation_to_type": "type", "validated": true, "ani": 79.5099, "matched_fragments": 663, "total_fragments": 2101, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nocardioides okcheonensis", "strain": "strain=MMS20-HV4-12", "accession": "GCA_020991065.1", "taxid": 2894081, "species_taxid": 2894081, "relation_to_type": "type", "validated": true, "ani": 79.0931, "matched_fragments": 650, "total_fragments": 2101, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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