{ "type": "genome", "identifier": "GCF_013409045.1", "organism": "Actinomadura citrea", "title": "Actinomadura citrea", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_013409045.1", "bioproject": "PRJNA224116", "biosample": "SAMN05877994", "wgs_master": "JACCBT000000000.1", "refseq_category": "reference genome", "taxid": "46158", "species_taxid": "46158", "organism_name": "Actinomadura citrea", "infraspecific_name": "strain=DSM 43461", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/07/13", "asm_name": "ASM1340904v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_013409045.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/013/409/045/GCF_013409045.1_ASM1340904v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "8992310", "genome_size_ungapped": "8992310", "gc_percent": "72.500000", "replicon_count": "0", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_013409045.1-RS_2024_03_29", "annotation_date": "2024-03-29", "total_gene_count": "8283", "protein_coding_gene_count": "8121", "non_coding_gene_count": "86", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-07-13", "dateModified": "2020-07-13", "datePublished": "2020-07-13", "_annotation": { "sample_count": 1, "sample_organism": [ "Actinomadura citrea" ], "sample_taxid": [ "46158" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], 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"psychrophilic_range_tmp": 0.0, "bacillus_cell_shape": 0.666, "coccus_cell_shape": 0.0, "filament_cell_shape": 0.333, "coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Actinomadura", "citrea" ], "quality": 4, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }