{ "tc_result": [ { "organism_name": "Galbitalea soli", "strain": "strain=DSM 105515", "accession": "GCA_013410525.1", "taxid": 1268042, "species_taxid": 1268042, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1014, "total_fragments": 1014, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Galbitalea soli", "strain": "strain=NBRC 108727", "accession": "GCA_010686725.1", "taxid": 1268042, "species_taxid": 1268042, "relation_to_type": "type", "validated": true, "ani": 99.9906, "matched_fragments": 1011, "total_fragments": 1014, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Protaetiibacter intestinalis", "strain": "strain=2DFWR-13", "accession": "GCA_003627075.1", "taxid": 2419774, "species_taxid": 2419774, "relation_to_type": "type", "validated": true, "ani": 79.623, "matched_fragments": 415, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Conyzicola lurida", "strain": "strain=DSM 105784", "accession": "GCA_014204935.1", "taxid": 1172621, "species_taxid": 1172621, "relation_to_type": "type", "validated": true, "ani": 79.6126, "matched_fragments": 459, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Conyzicola nivalis", "strain": "strain=CGMCC 1.12813", "accession": "GCA_014639655.1", "taxid": 1477021, "species_taxid": 1477021, "relation_to_type": "type", "validated": true, "ani": 79.3481, "matched_fragments": 426, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Protaetiibacter larvae", "strain": "strain=KACC 19322", "accession": "GCA_008365275.1", "taxid": 2592654, "species_taxid": 2592654, "relation_to_type": "type", "validated": true, "ani": 79.1049, "matched_fragments": 388, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter californiensis", "strain": "strain=CFBP 8216", "accession": "GCA_003576155.1", "taxid": 1401995, "species_taxid": 1401995, "relation_to_type": "type", "validated": true, "ani": 79.097, "matched_fragments": 297, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Marisediminicola senii", "strain": "strain=SM7_A14", "accession": "GCA_011057645.1", "taxid": 2711233, "species_taxid": 2711233, "relation_to_type": "type", "validated": true, "ani": 78.9839, "matched_fragments": 371, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cryobacterium tepidiphilum", "strain": "strain=NEAU-85", "accession": "GCA_003716325.1", "taxid": 2486026, "species_taxid": 2486026, "relation_to_type": "type", "validated": true, "ani": 78.9578, "matched_fragments": 316, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces humi", "strain": "strain=ANK073", "accession": "GCA_009720255.2", "taxid": 1766800, "species_taxid": 1766800, "relation_to_type": "type", "validated": true, "ani": 78.9467, "matched_fragments": 277, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Rathayibacter festucae", "strain": "strain=DSM 15932", "accession": "GCA_004011135.1", "taxid": 110937, "species_taxid": 110937, "relation_to_type": "type", "validated": true, "ani": 78.8698, "matched_fragments": 417, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter michiganensis", "strain": "strain=LMG7333", "accession": "GCA_021216655.1", "taxid": 28447, "species_taxid": 28447, "relation_to_type": "suspected-type", "validated": true, "ani": 78.8555, "matched_fragments": 387, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter californiensis", "strain": "strain=CFBP 8216", "accession": "GCA_021952865.1", "taxid": 1401995, "species_taxid": 1401995, "relation_to_type": "type", "validated": true, "ani": 78.7891, "matched_fragments": 377, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Leifsonia shinshuensis", "strain": "strain=DSM 15165", "accession": "GCA_013410375.1", "taxid": 150026, "species_taxid": 150026, "relation_to_type": "type", "validated": true, "ani": 78.7126, "matched_fragments": 422, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Clavibacter michiganensis subsp. insidiosus", "strain": "strain=CFBP 2404", "accession": "GCA_003693415.1", "taxid": 33014, "species_taxid": 28447, "relation_to_type": "type", "validated": true, "ani": 78.6418, "matched_fragments": 379, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces mariniharenae", "strain": "strain=NEAU-184", "accession": "GCA_008122505.1", "taxid": 2604423, "species_taxid": 2604423, "relation_to_type": "type", "validated": true, "ani": 78.6047, "matched_fragments": 417, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces ramosus", "strain": "strain=DSM 43045", "accession": "GCA_004216665.1", "taxid": 33879, "species_taxid": 33879, "relation_to_type": "type", "validated": true, "ani": 78.5307, "matched_fragments": 380, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Herbiconiux ginsengi", "strain": "strain=CGMCC 4.3491", "accession": "GCA_900107435.1", "taxid": 381665, "species_taxid": 381665, "relation_to_type": "type", "validated": true, "ani": 78.4777, "matched_fragments": 404, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Glaciihabitans tibetensis", "strain": "strain=CGMCC 1.12484", "accession": "GCA_003003265.1", "taxid": 1266600, "species_taxid": 1266600, "relation_to_type": "type", "validated": true, "ani": 78.4257, "matched_fragments": 330, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Agromyces cavernae", "strain": "strain=SYSU K20354", "accession": "GCA_021044935.1", "taxid": 2898659, "species_taxid": 2898659, "relation_to_type": "type", "validated": true, "ani": 78.2963, "matched_fragments": 373, "total_fragments": 1014, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_010686725.1", "gtdb_species": "s__Galbitalea soli", "ani": 99.9906, "matched_fragments": 1011, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Galbitalea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCA_001725325.1", "gtdb_species": "s__Rhodoglobus sp001725325", "ani": 80.0177, "matched_fragments": 459, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCA_903920435.1", "gtdb_species": "s__Rhodoglobus sp903920435", "ani": 79.7154, "matched_fragments": 416, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Rhodoglobus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.49", "min_intra_species_ani": "97.73", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.78", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_014204935.1", "gtdb_species": "s__Conyzicola lurida", "ani": 79.6126, "matched_fragments": 458, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Conyzicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002797715.1", "gtdb_species": "s__Diaminobutyricimonas aerilata", "ani": 79.384, "matched_fragments": 425, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Diaminobutyricimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002797855.1", "gtdb_species": "s__Compostimonas suwonensis", "ani": 79.3139, "matched_fragments": 401, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Compostimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004310685.1", "gtdb_species": "s__Conyzicola arctica", "ani": 79.1865, "matched_fragments": 416, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Conyzicola", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_008001035.1", "gtdb_species": "s__Homoserinimonas sp008001035", "ani": 79.054, "matched_fragments": 319, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Homoserinimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_018449675.1", "gtdb_species": "s__Glaciihabitans sp018449675", "ani": 79.0225, "matched_fragments": 401, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Glaciihabitans", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003067705.1", "gtdb_species": "s__Planctomonas deserti", "ani": 78.9827, "matched_fragments": 391, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Planctomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_006716125.1", "gtdb_species": "s__Homoserinimonas aerilata", "ani": 78.9403, "matched_fragments": 327, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Homoserinimonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016907085.1", "gtdb_species": "s__Clavibacter michiganensis_O", "ani": 78.778, "matched_fragments": 392, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Clavibacter", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013414345.1", "gtdb_species": "s__Marinisubtilis indicus", "ani": 78.676, "matched_fragments": 342, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Marinisubtilis", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "96.33", "min_intra_species_ani": "95.90", "mean_intra_species_af": "0.85", "min_intra_species_af": "0.83", "num_clustered_genomes": 6, "status": "-" }, { "accession": "GCF_004216665.1", "gtdb_species": "s__Agromyces ramosus", "ani": 78.5499, "matched_fragments": 378, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003003265.1", "gtdb_species": "s__Glaciihabitans tibetensis", "ani": 78.4018, "matched_fragments": 332, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Glaciihabitans", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001428255.1", "gtdb_species": "s__Agromyces sp001428255", "ani": 78.3582, "matched_fragments": 395, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004801905.1", "gtdb_species": "s__Leifsonia_A flavus", "ani": 78.3261, "matched_fragments": 314, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Leifsonia_A", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003384855.1", "gtdb_species": "s__Agromyces sp003384855", "ani": 78.3245, "matched_fragments": 392, "total_fragments": 1014, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Agromyces", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }