{ "tc_result": [ { "organism_name": "Neisseria dentiae", "strain": "strain=DSM 19151", "accession": "GCA_014055005.1", "taxid": 194197, "species_taxid": 194197, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 916, "total_fragments": 918, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Neisseria dentiae", "strain": "strain=NCTC13012", "accession": "GCA_900453685.1", "taxid": 194197, "species_taxid": 194197, "relation_to_type": "type", "validated": true, "ani": 99.9998, "matched_fragments": 915, "total_fragments": 918, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Neisseria dentiae", "strain": "strain=DSM 19151", "accession": "GCA_002108595.1", "taxid": 194197, "species_taxid": 194197, "relation_to_type": "type", "validated": true, "ani": 99.9262, "matched_fragments": 851, "total_fragments": 918, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Neisseria dumasiana", "strain": "strain=93087", "accession": "GCA_002108505.1", "taxid": 1931275, "species_taxid": 1931275, "relation_to_type": "type", "validated": true, "ani": 82.0066, "matched_fragments": 516, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria dumasiana", "strain": "strain=LMG 30012", "accession": "GCA_022870885.1", "taxid": 1931275, "species_taxid": 1931275, "relation_to_type": "type", "validated": true, "ani": 81.9953, "matched_fragments": 535, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Uruburuella suis", "strain": "strain=1258/02", "accession": "GCA_022870845.1", "taxid": 252130, "species_taxid": 252130, "relation_to_type": "type", "validated": true, "ani": 81.0067, "matched_fragments": 529, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Uruburuella suis", "strain": "strain=DSM 17474", "accession": "GCA_004341385.1", "taxid": 252130, "species_taxid": 252130, "relation_to_type": "type", "validated": true, "ani": 80.8862, "matched_fragments": 508, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Uruburuella testudinis", "strain": "strain=CCUG 63373m", "accession": "GCA_022870865.1", "taxid": 1282863, "species_taxid": 1282863, "relation_to_type": "type", "validated": true, "ani": 80.8171, "matched_fragments": 526, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kingella potus", "strain": "strain=NCTC13336", "accession": "GCA_900451175.1", "taxid": 265175, "species_taxid": 265175, "relation_to_type": "type", "validated": true, "ani": 80.2166, "matched_fragments": 412, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Kingella potus", "strain": "strain=3/SID/1128", "accession": "GCA_022870985.1", "taxid": 265175, "species_taxid": 265175, "relation_to_type": "type", "validated": true, "ani": 80.1233, "matched_fragments": 411, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria animalis", "strain": "strain=ATCC 49930", "accession": "GCA_008806995.1", "taxid": 492, "species_taxid": 492, "relation_to_type": "type", "validated": true, "ani": 80.0785, "matched_fragments": 353, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria animalis", "strain": "strain=NCTC10212", "accession": "GCA_900636515.1", "taxid": 492, "species_taxid": 492, "relation_to_type": "type", "validated": true, "ani": 79.985, "matched_fragments": 352, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Neisseria zalophi", "strain": "strain=ATCC BAA-2455", "accession": "GCA_008807015.1", "taxid": 640030, "species_taxid": 640030, "relation_to_type": "type", "validated": true, "ani": 78.7681, "matched_fragments": 348, "total_fragments": 918, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 99.48, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014055005.1", "gtdb_species": "s__Neisseria dentiae", "ani": 100.0, "matched_fragments": 915, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.98", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 3, "status": "conclusive" }, { "accession": "GCF_014297595.1", "gtdb_species": "s__Neisseria musculi", "ani": 86.8403, "matched_fragments": 654, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.59", "min_intra_species_ani": "98.59", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900187305.1", "gtdb_species": "s__Neisseria zoodegmatis", "ani": 82.1732, "matched_fragments": 530, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.30", "min_intra_species_ani": "96.60", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.90", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_002108505.1", "gtdb_species": "s__Neisseria dumasiana", "ani": 81.9523, "matched_fragments": 519, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.54", "min_intra_species_ani": "97.26", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.89", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_900637855.1", "gtdb_species": "s__Neisseria animaloris", "ani": 81.4465, "matched_fragments": 450, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.59", "min_intra_species_ani": "98.11", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 5, "status": "-" }, { "accession": "GCF_001592185.1", "gtdb_species": "s__Neisseria denitrificans", "ani": 80.9063, "matched_fragments": 355, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_004341385.1", "gtdb_species": "s__Neisseria suis", "ani": 80.8862, "matched_fragments": 507, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.29", "min_intra_species_ani": "97.17", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.92", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900638685.1", "gtdb_species": "s__Neisseria weaveri", "ani": 80.7368, "matched_fragments": 309, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.19", "min_intra_species_ani": "98.86", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.97", "num_clustered_genomes": 8, "status": "-" }, { "accession": "GCF_002216145.1", "gtdb_species": "s__Neisseria chenwenguii", "ani": 80.5597, "matched_fragments": 475, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.73", "min_intra_species_ani": "99.73", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014055025.1", "gtdb_species": "s__Neisseria bacilliformis", "ani": 80.3282, "matched_fragments": 423, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.33", "min_intra_species_ani": "96.96", "mean_intra_species_af": "0.94", "min_intra_species_af": "0.89", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCF_005886145.1", "gtdb_species": "s__Neisseria sp000090875", "ani": 80.2529, "matched_fragments": 435, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.69", "min_intra_species_ani": "97.41", "mean_intra_species_af": "0.97", "min_intra_species_af": "0.94", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_900636515.1", "gtdb_species": "s__Neisseria animalis", "ani": 80.0356, "matched_fragments": 350, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_014054945.1", "gtdb_species": "s__Neisseria sicca", "ani": 79.4501, "matched_fragments": 411, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 96.5569, "mean_intra_species_ani": "99.97", "min_intra_species_ani": "99.97", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_008807015.1", "gtdb_species": "s__Neisseria zalophi", "ani": 78.975, "matched_fragments": 344, "total_fragments": 918, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Neisseriaceae;g__Neisseria", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }