# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_5	LOCUS_00050	sequence1:2744..3739(+)	partial			WP_002295256.1	YidC/Oxa1 family membrane protein insertase	67.4	73.5	34.7
MGA_10	LOCUS_00100	sequence1:8548..9498(-)	partial			WP_011057233.1	alpha/beta fold hydrolase	72.2	79.6	25.8
MGA_22	LOCUS_00220	sequence1:19014..19409(+)	internal_stop_codon	19407..19409(+)		WP_011986650.1	ABC transporter permease	87.8	17.3	55.7
MGA_23	LOCUS_00230	sequence1:19434..21062(+)	internal_stop_codon	19407..19409(+)		WP_011986650.1	ABC transporter permease	99.3	78.5	32.9
MGA_90	LOCUS_00900	sequence1:91370..108256(+)	partial			WP_012256318.1	SdrD B-like domain-containing protein	13.7	10.7	23.2
MGA_147	LOCUS_01470	sequence1:169394..169834(+)	partial			WP_011986910.1	threonine/serine exporter family protein	81.5	73.5	32.8
MGA_173	LOCUS_01730	sequence1:195413..197770(+)	partial			WP_027390899.1	InlB B-repeat-containing protein	33.5	4.3	37.2
MGA_174	LOCUS_01740	sequence1:197872..199908(+)	partial			WP_027390899.1	InlB B-repeat-containing protein	17.3	2.0	33.9
MGA_179	LOCUS_01790	sequence1:201696..203714(+)	partial			WP_027390899.1	InlB B-repeat-containing protein	18.5	2.1	54.0
MGA_180	LOCUS_01800	sequence1:203906..204457(+)	partial			WP_011393457.1	xanthine dehydrogenase FAD-binding subunit XdhB	93.4	58.2	33.3
MGA_182	LOCUS_01820	sequence1:205544..207472(+)	partial			WP_000826239.1	putative mucin/carbohydrate-binding domain-containing protein	22.4	21.6	30.4
MGA_184	LOCUS_01840	sequence1:208891..210711(+)	partial			WP_027390899.1	InlB B-repeat-containing protein	11.1	1.1	55.9
MGA_186	LOCUS_01860	sequence1:211192..214188(-)	partial			WP_014208390.1	ATP-binding protein	64.2	69.4	26.7
MGA_187	LOCUS_01870	sequence1:214368..215435(+)	partial			WP_002382901.1	polysaccharide deacetylase family protein	53.2	36.6	43.9
MGA_190	LOCUS_01900	sequence1:216402..217247(-)	partial			WP_003245023.1	peptidoglycan-N-acetylmuramic acid deacetylase PdaC	68.7	41.8	41.5
MGA_221	LOCUS_02210	sequence1:248703..249185(+)	partial			WP_011860641.1	ComF family protein	92.5	56.9	41.1
MGA_227	LOCUS_02270	sequence1:253921..254478(+)	internal_stop_codon	254476..254478(+)		WP_002681377.1	virulence RhuM family protein	93.5	51.0	68.2
MGA_228	LOCUS_02280	sequence1:254530..254940(+)	internal_stop_codon	254476..254478(+)		WP_002681377.1	virulence RhuM family protein	99.3	39.8	65.9
MGA_240	LOCUS_02400	sequence1:267482..268714(+)	partial			WP_010932125.1	CpaF family protein	79.3	67.5	46.9
MGA_247	LOCUS_02470	sequence1:273628..274782(+)	partial			WP_012258514.1	FHA domain-containing protein	20.3	8.9	44.3
MGA_248	LOCUS_02480	sequence1:274823..275752(+)	partial			WP_011948167.1	rhomboid family intramembrane serine protease	56.6	52.8	36.1
MGA_249	LOCUS_02490	sequence1:275718..276398(-)	partial			WP_001983427.1	response regulator	93.8	41.9	27.6
MGA_260	LOCUS_02600	sequence1:286590..287453(+)	partial			WP_002382901.1	polysaccharide deacetylase family protein	70.0	38.4	42.3
MGA_261	LOCUS_02610	sequence1:287640..288167(+)	partial			WP_003435466.1	N-acetylmuramoyl-L-alanine amidase	98.9	64.9	39.3
MGA_385	LOCUS_03850	sequence1:394589..396004(+)	partial			WP_002304144.1	beta-glucoside-specific PTS transporter subunit IIABC	98.3	72.1	32.1
MGA_394	LOCUS_03940	sequence1:405302..405568(-)	partial			WP_041272543.1	autorepressor SdpR family transcription factor	90.9	70.2	66.2
MGA_413	LOCUS_04130	sequence1:424432..425517(+)	partial			WP_010966511.1	PucR family transcriptional regulator	50.7	56.1	30.1
MGA_424	LOCUS_04240	sequence1:436835..439036(+)	partial			WP_011860848.1	bifunctional diguanylate cyclase/phosphodiesterase	56.6	40.3	41.0
MGA_439	LOCUS_04370	sequence1:460836..461510(+)	partial			WP_009903185.1	C40 family peptidase	62.9	39.1	36.5
MGA_449	LOCUS_04470	sequence1:469249..469893(+)	partial			WP_010942917.1	NlpC/P60 family protein	45.3	38.6	45.6
MGA_452	LOCUS_04500	sequence1:473092..473559(+)	frameshift		473544	WP_010990051.1	fructose-specific PTS transporter subunit EIIC	92.9	22.1	32.4
MGA_454	LOCUS_04520	sequence1:473921..474970(+)	frameshift,internal_stop_codon	473896..473898(+)	473937,473873	WP_010963557.1	fructose-specific PTS transporter subunit EIIC	93.7	70.5	44.6
MGA_483	LOCUS_04810	sequence1:502171..502698(+)	frameshift		502674	WP_009891654.1	MATE family efflux transporter	94.3	35.3	44.2
MGA_484	LOCUS_04820	sequence1:502695..503582(+)	frameshift		502677	WP_011016772.1	MATE family efflux transporter	90.2	58.7	41.9
MGA_487	LOCUS_04850	sequence1:504999..506450(+)	partial			WP_011861061.1	diguanylate cyclase	60.7	25.0	34.3
MGA_497	LOCUS_04950	sequence1:516930..517790(+)	partial			WP_004440261.1	endolytic transglycosylase MltG	79.0	63.8	40.6
MGA_516	LOCUS_05140	sequence1:538870..539499(-)	partial			WP_007052535.1	transcriptional repressor LexA	56.5	49.0	38.7
MGA_528	LOCUS_05260	sequence1:542906..543481(+)	partial			WP_010905689.1	DUF1071 domain-containing protein	66.0	72.9	49.0
MGA_531	LOCUS_05290	sequence1:544304..544663(+)	partial			WP_013913565.1	hypothetical protein	87.4	64.0	57.1
MGA_532	LOCUS_05300	sequence1:544638..545405(+)	partial			WP_011461098.1	HNH endonuclease	97.3	63.5	36.0
MGA_560	LOCUS_05580	sequence1:561868..562113(+)	partial			WP_011816468.1	phage tail tube protein	97.5	26.1	48.8
MGA_565	LOCUS_05630	sequence1:565414..567087(+)	partial			WP_000273909.1	AAA family ATPase	52.2	50.0	30.6
MGA_577	LOCUS_05750	sequence1:576509..576964(+)	partial			WP_010879839.1	hypothetical protein	56.3	82.2	48.2
MGA_578	LOCUS_05760	sequence1:576961..579204(+)	partial			WP_030063223.1	phage/plasmid primase, P4 family	60.4	82.8	26.2
MGA_584	LOCUS_05820	sequence1:582614..583405(+)	partial			WP_011166676.1	methionine adenosyltransferase	77.2	68.5	27.0
MGA_586	LOCUS_05840	sequence1:584673..586520(+)	partial			WP_041272166.1	DNA cytosine methyltransferase	84.7	72.2	35.6
MGA_593	LOCUS_05910	sequence1:591051..591782(+)	partial			WP_225426975.1	Clp protease ClpP	74.9	73.9	40.1
MGA_603	LOCUS_06010	sequence1:596041..599226(+)	partial			WP_010714197.1	tail protein	63.4	72.1	27.3
MGA_605	LOCUS_06030	sequence1:599870..601327(+)	partial			WP_011101125.1	phage tail spike protein	74.0	58.5	27.8
MGA_608	LOCUS_06060	sequence1:603744..605633(+)	partial			WP_000536253.1	DUF859 family phage minor structural protein	73.6	71.1	28.0
MGA_610	LOCUS_06080	sequence1:606131..606994(+)	partial			WP_000405191.1	peptidoglycan amidohydrolase family protein	18.8	10.9	55.6
MGA_613	LOCUS_06110	sequence1:607759..609552(+)	partial			WP_081586538.1	recombinase family protein	68.2	84.9	46.6
MGA_621	LOCUS_06190	sequence1:615205..615870(+)	partial			WP_003722531.1	bacteriophage Gp15 family protein	70.6	80.1	25.5
MGA_624	LOCUS_06220	sequence1:622184..623932(+)	partial			WP_011101125.1	phage tail spike protein	54.0	51.0	26.4
MGA_630	LOCUS_06280	sequence1:626493..627140(+)	partial			WP_010939456.1	phage regulatory protein	42.3	31.8	57.0
MGA_647	LOCUS_06450	sequence1:640067..640579(+)	partial			WP_011109350.1	ATP-binding protein	98.8	41.9	28.8
MGA_649	LOCUS_06470	sequence1:641789..642199(+)	frameshift		642184	WP_003568240.1	mannose/fructose/sorbose PTS transporter subunit IIA	89.7	38.3	38.7
MGA_657	LOCUS_06550	sequence1:647898..648602(+)	frameshift		648587	WP_014498593.1	PDDEXK nuclease domain-containing protein	93.6	46.8	37.9
MGA_658	LOCUS_06560	sequence1:648583..648897(+)	frameshift		648581	WP_011103420.1	PDDEXK nuclease domain-containing protein	99.0	29.4	52.4
MGA_668	LOCUS_06660	sequence1:659823..660503(+)	partial			WP_011459063.1	glycyl-radical enzyme activating protein	80.1	58.4	38.5
MGA_670	LOCUS_06680	sequence1:661275..663833(-)	partial			WP_196793289.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	60.1	63.9	43.8
MGA_672	LOCUS_06700	sequence1:666146..667165(+)	partial			WP_002294254.1	trehalose operon repressor	19.2	27.4	46.2
MGA_699	LOCUS_06970	sequence1:695113..695433(-)	partial			WP_011460667.1	pirin family protein	71.7	27.3	57.9
MGA_703	LOCUS_07010	sequence1:698391..700883(+)	partial			WP_012256205.1	right-handed parallel beta-helix repeat-containing protein	38.3	48.0	27.9
MGA_722	LOCUS_07200	sequence1:714595..715161(+)	partial			WP_003428156.1	DUF2313 domain-containing protein	85.6	70.3	24.4
MGA_723	LOCUS_07210	sequence1:715163..716293(+)	partial			WP_011460131.1	phage tail protein	30.6	23.5	31.6
MGA_726	LOCUS_07240	sequence1:716862..717662(+)	partial			WP_011861048.1	N-acetylmuramoyl-L-alanine amidase	72.9	66.8	35.1
MGA_729	LOCUS_07270	sequence1:718450..719124(-)	partial			WP_013389449.1	glycoside hydrolase N-terminal domain-containing protein	75.0	8.2	30.0
MGA_732	LOCUS_07300	sequence1:720589..726009(+)	partial			WP_011461428.1	InlB B-repeat-containing protein	16.0	9.3	30.4
MGA_747	LOCUS_07450	sequence1:743371..744177(+)	frameshift,internal_stop_codon	744175..744177(+)	744180	WP_003643977.1	amino acid ABC transporter substrate-binding protein/permease	99.6	52.1	49.4
MGA_748	LOCUS_07460	sequence1:744189..744872(+)	frameshift		744174	WP_010989593.1	amino acid ABC transporter substrate-binding protein/permease	97.4	44.2	53.2
MGA_759	LOCUS_07570	sequence1:754445..755353(+)	partial			WP_164926948.1	metallophosphoesterase family protein	71.9	55.2	27.9
MGA_768	LOCUS_07660	sequence1:764189..766180(+)	partial			WP_011071157.1	S8 family serine peptidase	59.7	42.8	32.4
MGA_769	LOCUS_07670	sequence1:766392..767726(+)	partial			WP_013389449.1	glycoside hydrolase N-terminal domain-containing protein	55.9	12.7	29.9
MGA_774	LOCUS_07720	sequence1:772295..773443(+)	partial			WP_010918519.1	glycoside hydrolase family 99-like domain-containing protein	97.9	42.1	36.4
MGA_777	LOCUS_07750	sequence1:774726..775355(+)	partial			WP_000966303.1	CatB-related O-acetyltransferase	61.7	72.4	41.8
MGA_792	LOCUS_07900	sequence1:795652..796428(+)	partial			WP_012257609.1	ABC transporter permease	85.3	35.9	30.1
MGA_794	LOCUS_07920	sequence1:797190..800546(+)	partial			WP_002469217.1	CDP-glycerol glycerophosphotransferase family protein	36.9	53.9	32.7
MGA_797	LOCUS_07950	sequence1:801936..803060(+)	partial			WP_003243463.1	teichoic acid poly(glycerol phosphate) polymerase	99.2	49.7	41.8
MGA_798	LOCUS_07960	sequence1:803064..805520(+)	partial			WP_010905630.1	CDP-glycerol glycerophosphotransferase family protein	74.0	74.3	34.9
MGA_800	LOCUS_07980	sequence1:807700..810081(+)	partial			WP_014636419.1	alkaline phosphatase family protein	72.3	67.4	31.7
MGA_817	LOCUS_08150	sequence1:826402..826890(-)	partial			WP_010965371.1	sporulation transcription factor Spo0A	67.3	39.9	39.3
MGA_841	LOCUS_08390	sequence1:855118..856428(-)	partial			WP_011861172.1	N-acetylglucosaminidase	92.7	66.1	28.0
MGA_842	LOCUS_08400	sequence1:856613..858034(-)	partial			WP_011861172.1	N-acetylglucosaminidase	22.4	17.1	37.7
MGA_849	LOCUS_08470	sequence1:863974..865065(+)	partial			WP_029495419.1	CHAP domain-containing protein	65.8	56.5	35.8
MGA_896	LOCUS_08940	sequence1:911702..912988(+)	partial			WP_164930145.1	alcohol acetyltransferase	30.4	26.1	45.4
MGA_898	LOCUS_08960	sequence1:913665..914588(+)	partial			WP_005814192.1	alpha/beta hydrolase	87.0	65.0	41.9
MGA_908	LOCUS_09060	sequence1:926496..928181(+)	partial			WP_158306572.1	S8 family peptidase	93.8	45.9	33.6
MGA_933	LOCUS_09310	sequence1:955229..957796(+)	partial			WP_002263668.1	CRISPR-associated helicase/endonuclease Cas3	44.2	47.4	27.7
MGA_934	LOCUS_09320	sequence1:957811..958308(+)	partial			WP_012582993.1	CRISPR-associated protein Cas4	60.0	61.3	34.6
MGA_940	LOCUS_09380	sequence1:964405..965802(+)	partial			WP_143274454.1	type III-B CRISPR-associated protein Cas10/Cmr2	40.0	20.8	27.1
MGA_943	LOCUS_09410	sequence1:968209..969081(+)	partial			WP_010880204.1	type III-B CRISPR module RAMP protein Cmr4	75.2	67.1	20.9
MGA_954	LOCUS_09520	sequence1:980633..981898(+)	partial			WP_021362447.1	C40 family peptidase	71.0	73.1	26.1
MGA_969	LOCUS_09670	sequence1:997485..998900(+)	partial			WP_013389345.1	RICIN domain-containing protein	48.2	27.7	33.3
MGA_971	LOCUS_09690	sequence1:999540..1000910(+)	partial			WP_009994355.1	glycoside hydrolase family 25 protein	54.6	42.0	31.6
MGA_1009	LOCUS_10070	sequence1:1037236..1037985(+)	partial			WP_011860957.1	N-acetylmuramoyl-L-alanine amidase	85.9	72.8	43.7
MGA_1032	LOCUS_10300	sequence1:1063877..1065085(+)	partial			WP_012869804.1	deoxyguanosinetriphosphate triphosphohydrolase	72.9	81.3	31.8
MGA_1053	LOCUS_10510	sequence1:1085659..1086057(+)	partial			WP_002355985.1	transcriptional regulator GutM	59.8	48.4	34.2
MGA_1063	LOCUS_10610	sequence1:1093584..1095188(+)	partial			WP_012775008.1	efflux RND transporter periplasmic adaptor subunit	38.2	54.3	29.8
MGA_1096	LOCUS_10940	sequence1:1129704..1131020(+)	partial			WP_165447207.1	MFS transporter	65.3	67.8	20.7
MGA_1097	LOCUS_10950	sequence1:1131237..1132385(+)	partial			WP_011948254.1	SH3 domain-containing protein	85.9	41.9	28.9
MGA_1098	LOCUS_10960	sequence1:1132528..1133811(+)	partial			WP_002899346.1	glucosaminidase domain-containing protein	31.1	67.8	32.6
MGA_1102	LOCUS_11000	sequence1:1137843..1138163(+)	partial			WP_010881251.1	thioredoxin	93.4	71.2	43.4
MGA_1132	LOCUS_11300	sequence1:1171205..1171900(+)	partial			WP_011393499.1	molybdenum cofactor cytidylyltransferase	81.4	43.7	33.7
MGA_1150	LOCUS_11480	sequence1:1187750..1189501(+)	partial			WP_009903108.1	bifunctional germination protease/germinant receptor pseudoprotease CspBA	89.2	45.3	39.1
MGA_1170	LOCUS_11680	sequence1:1208107..1209345(+)	partial			WP_012048095.1	GTPase HflX	98.8	69.2	43.9
MGA_1171	LOCUS_11690	sequence1:1209354..1209848(+)	partial			WP_003440056.1	PRD domain-containing protein	98.8	60.0	30.8
MGA_1194	LOCUS_11920	sequence1:1234349..1234567(+)	partial			WP_003421370.1	ATP synthase F0 subunit C	66.7	55.8	60.4
MGA_1202	LOCUS_12000	sequence1:1242836..1245658(+)	partial			WP_130435197.1	ATP-binding protein	42.4	56.1	41.2
MGA_1234	LOCUS_12320	sequence1:1272342..1273124(+)	partial			WP_002681887.1	hypothetical protein	68.1	64.6	31.4
MGA_1257	LOCUS_12550	sequence1:1294170..1294607(+)	partial			WP_011986653.1	BglG family transcription antiterminator	89.0	18.5	41.1
MGA_1265	LOCUS_12630	sequence1:1302744..1304660(+)	partial			WP_011861602.1	BglG family transcription antiterminator	73.7	76.3	26.5
MGA_1298	LOCUS_12960	sequence1:1345160..1348075(+)	partial			WP_015444536.1	penicillin-binding protein 2	33.2	55.1	28.5
MGA_1304	LOCUS_13020	sequence1:1351515..1352492(+)	partial			WP_010964579.1	D-alanyl-D-alanine carboxypeptidase family protein	72.3	56.0	36.2
MGA_1308	LOCUS_13060	sequence1:1355530..1356060(+)	partial			WP_164928580.1	cell division protein SepF	59.1	54.7	39.0
MGA_1310	LOCUS_13080	sequence1:1356827..1357414(+)	partial			WP_011392381.1	DivIVA domain-containing protein	72.3	77.2	38.7
MGA_1329	LOCUS_13270	sequence1:1375246..1376178(-)	partial			WP_014518885.1	ribonuclease H-like domain-containing protein	54.5	64.9	30.6
MGA_1369	LOCUS_13670	sequence1:1415822..1417051(+)	partial			WP_002288135.1	sugar ABC transporter substrate-binding protein	80.4	74.7	20.7
MGA_1370	LOCUS_13680	sequence1:1417051..1420401(+)	partial			WP_196793289.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	47.4	65.8	47.7
MGA_1371	LOCUS_13690	sequence1:1420462..1421133(+)	partial			WP_003243462.1	L-Ala--D-Glu endopeptidase	66.4	41.7	45.9
MGA_1381	LOCUS_13790	sequence1:1433307..1434614(+)	frameshift,internal_stop_codon	1434612..1434614(+)	1434641	WP_013095039.1	PTS transporter subunit EIIC	94.5	75.5	39.1
MGA_1391	LOCUS_13890	sequence1:1443187..1443882(+)	partial			WP_009896313.1	M15 family metallopeptidase	82.3	70.4	46.3
MGA_1403	LOCUS_14010	sequence1:1455930..1457429(+)	partial			WP_003246380.1	L,D-transpeptidase	27.3	71.6	36.2
MGA_1406	LOCUS_14040	sequence1:1460970..1461440(+)	partial			WP_011476292.1	helix-turn-helix transcriptional regulator	58.3	44.3	44.0
MGA_1416	LOCUS_14140	sequence1:1470903..1471409(+)	partial			WP_009902813.1	AraC family transcriptional regulator	96.4	54.2	35.9
MGA_1421	LOCUS_14190	sequence1:1473777..1474217(+)	frameshift		1473772	WP_011202637.1	carboxymuconolactone decarboxylase family protein	95.2	49.6	57.6
MGA_1426	LOCUS_14240	sequence1:1478527..1479009(+)	partial			WP_011020466.1	cyclophilin-like fold protein	70.6	37.7	54.4
MGA_1439	LOCUS_14370	sequence1:1488182..1491847(+)	partial			WP_011071157.1	S8 family serine peptidase	23.3	35.3	36.2
MGA_1443	LOCUS_14410	sequence1:1494247..1494777(-)	partial			WP_011251052.1	ECF transporter S component	85.2	72.9	35.3
MGA_1448	LOCUS_14460	sequence1:1500705..1502747(+)	partial			WP_066523182.1	transglutaminase domain-containing protein	49.7	49.9	24.9
MGA_1449	LOCUS_14470	sequence1:1502868..1503329(+)	partial			WP_012804579.1	NlpC/P60 family protein	64.7	34.3	40.4
MGA_1450	LOCUS_14480	sequence1:1503576..1507451(+)	partial			WP_130435197.1	ATP-binding protein	28.8	51.7	40.5
MGA_1452	LOCUS_14500	sequence1:1508003..1509418(+)	partial			WP_012066906.1	5'-nucleotidase C-terminal domain-containing protein	45.6	31.7	29.1
MGA_1454	LOCUS_14520	sequence1:1510084..1512006(+)	partial			WP_196793289.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	85.0	68.6	40.5
MGA_1465	LOCUS_14630	sequence1:1518893..1519372(+)	frameshift		1519360,1519505,1519465,1519351	WP_157860391.1	leucine-rich repeat protein	54.7	3.8	39.1
MGA_1469	LOCUS_14670	sequence1:1523249..1524739(-)	partial			WP_012048120.1	N-acetylmuramoyl-L-alanine amidase	42.1	20.9	35.8
MGA_1470	LOCUS_14680	sequence1:1524894..1526357(-)	partial			WP_003242758.1	N-acetylmuramoyl-L-alanine amidase LytC	48.0	44.8	30.3
MGA_1481	LOCUS_14790	sequence1:1537905..1538681(-)	partial			WP_003815086.1	class I SAM-dependent methyltransferase	57.0	56.8	33.1
MGA_1485	LOCUS_14830	sequence1:1542598..1543332(+)	partial			WP_010957294.1	ankyrin repeat domain-containing protein	76.6	18.3	28.4
MGA_1496	LOCUS_14940	sequence1:1554055..1555437(+)	partial			WP_002379340.1	cell wall metabolism sensor histidine kinase WalK	68.7	53.9	34.7
MGA_1499	LOCUS_14970	sequence1:1558297..1558881(+)	partial			WP_011459972.1	NTP transferase domain-containing protein	94.3	46.5	33.2
MGA_1504	LOCUS_15020	sequence1:1562173..1563288(+)	partial			WP_010964588.1	stage II sporulation protein P	56.9	55.9	33.8
MGA_1507	LOCUS_15050	sequence1:1566323..1567201(-)	partial			WP_009967303.1	serine protease AprX	91.8	65.8	36.7
MGA_1518	LOCUS_15160	sequence1:1577053..1578003(+)	partial			WP_009888861.1	hemolysin family protein	80.4	58.0	36.4
MGA_1520	LOCUS_15180	sequence1:1578871..1580397(+)	partial			WP_003244653.1	cell wall-associated protease WprA	72.2	46.8	27.8
MGA_1529	LOCUS_15270	sequence1:1588148..1589023(+)	partial			WP_000719220.1	aminopeptidase AmpS	97.6	59.3	28.5
MGA_1557	LOCUS_15550	sequence1:1616648..1617289(+)	partial			WP_002680258.1	leucine--tRNA ligase	86.4	22.0	62.4
MGA_1558	LOCUS_15560	sequence1:1617235..1617843(+)	frameshift		1617792	WP_003722014.1	deoxyguanosinetriphosphate triphosphohydrolase	70.3	30.5	50.7
MGA_1559	LOCUS_15570	sequence1:1617840..1618670(+)	frameshift		1617792	WP_003722014.1	deoxyguanosinetriphosphate triphosphohydrolase	99.3	57.6	35.7
MGA_1575	LOCUS_15730	sequence1:1631062..1631778(+)	partial			WP_005480625.1	HD-GYP domain-containing protein	60.1	35.5	36.8
MGA_1589	LOCUS_15870	sequence1:1647615..1648085(+)	partial			WP_010942444.1	aspartate kinase	98.7	38.0	41.6
MGA_1615	LOCUS_16130	sequence1:1673080..1673880(+)	partial			WP_004193964.1	SAM-dependent methyltransferase	79.3	32.2	30.6
MGA_1618	LOCUS_16160	sequence1:1675838..1676065(+)	frameshift		1676059	WP_002896230.1	flotillin family protein	98.7	15.0	47.3
MGA_1619	LOCUS_16170	sequence1:1676062..1677081(+)	frameshift		1676059	WP_012027392.1	flotillin family protein	96.5	70.8	41.4
MGA_1623	LOCUS_16210	sequence1:1680007..1681092(+)	partial			WP_013096963.1	flagellin lysine-N-methylase	32.7	30.9	32.8
MGA_1627	LOCUS_16250	sequence1:1684170..1684547(+)	frameshift		1684538	WP_011016873.1	M20 family metallopeptidase	92.8	30.2	48.7
MGA_1628	LOCUS_16260	sequence1:1684552..1685280(+)	frameshift		1684322,1684301,1684542	WP_011861827.1	M20 family metallopeptidase	99.6	61.9	37.7
MGA_1629	LOCUS_16270	sequence1:1685538..1685726(+)	internal_stop_codon	1685724..1685726(+)		WP_001103844.1	sensor domain-containing diguanylate cyclase	82.3	9.2	51.0
MGA_1639	LOCUS_16370	sequence1:1691409..1691591(+)	partial			WP_003106013.1	two-component system response regulator cyclic di-GMP-specific phosphodiesterase RocR	90.0	13.8	57.4
MGA_1662	LOCUS_16600	sequence1:1716265..1717122(+)	partial			WP_011861335.1	MerR family transcriptional regulator	81.4	62.0	37.0
MGA_1672	LOCUS_16700	sequence1:1725571..1726638(-)	partial			WP_002681579.1	putative ABC transporter permease	44.8	59.8	38.8
MGA_1677	LOCUS_16750	sequence1:1731503..1732063(-)	partial			WP_010966859.1	CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase	73.1	76.4	36.7
MGA_1689	LOCUS_16870	sequence1:1744023..1746374(-)	partial			WP_011460393.1	translation initiation factor IF-2	74.3	59.4	62.5
MGA_1709	LOCUS_17070	sequence1:1763391..1764044(-)	partial			WP_112433653.1	dihydrolipoamide acetyltransferase family protein	95.9	42.8	38.0
MGA_1710	LOCUS_17080	sequence1:1764037..1764279(-)	partial			WP_000863368.1	dihydrolipoyl dehydrogenase	95.0	13.0	53.9
MGA_1717	LOCUS_17150	sequence1:1772936..1774459(-)	partial			WP_011949077.1	diguanylate cyclase	69.4	48.1	39.5
MGA_1770	LOCUS_17680	sequence1:1825005..1825535(-)	internal_stop_codon	1825005..1825007(-)		WP_012048277.1	cation diffusion facilitator family transporter	92.6	41.6	35.6
MGA_1773	LOCUS_17710	sequence1:1827742..1828392(-)	frameshift		1827873	WP_010966274.1	SDR family oxidoreductase	78.7	63.4	41.2
MGA_1781	LOCUS_17790	sequence1:1834592..1835200(-)	partial			WP_192037662.1	histidine phosphatase family protein	79.2	73.7	29.2
MGA_1801	LOCUS_17990	sequence1:1855926..1857803(-)	partial			WP_000796568.1	heavy metal translocating P-type ATPase	93.0	74.0	59.9
MGA_1808	LOCUS_18060	sequence1:1862456..1862902(-)	partial			WP_012804033.1	PTS sugar transporter subunit IIA	77.0	57.0	35.1
MGA_1854	LOCUS_18520	sequence1:1912630..1915029(-)	partial			WP_196793289.1	PAS domain-containing hybrid sensor histidine kinase/response regulator	67.5	67.2	45.0
MGA_1855	LOCUS_18530	sequence1:1915184..1917556(-)	frameshift		1917675	WP_011862014.1	diguanylate cyclase	24.6	23.2	57.2
MGA_1856	LOCUS_18540	sequence1:1917529..1918470(-)	frameshift		1917675	WP_011862014.1	diguanylate cyclase	45.4	17.0	67.6
MGA_1865	LOCUS_18630	sequence1:1924553..1925032(-)	partial			WP_011476292.1	helix-turn-helix transcriptional regulator	52.2	40.9	49.4
MGA_1869	LOCUS_18670	sequence1:1926882..1928558(-)	partial			WP_003437032.1	sensor domain-containing diguanylate cyclase	37.8	39.9	33.2
MGA_1870	LOCUS_18680	sequence1:1928680..1929285(-)	partial			WP_008764422.1	bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE	70.1	61.6	30.5
MGA_1901	LOCUS_18990	sequence1:1959253..1959429(-)	partial			WP_010964600.1	30S ribosomal protein S21	70.7	70.7	73.2
MGA_1927	LOCUS_19250	sequence1:1985803..1986342(-)	partial			WP_071541841.1	hypothetical protein	81.0	69.8	23.6
MGA_1954	LOCUS_19520	sequence1:2010733..2012022(-)	partial			WP_049769589.1	TRAP transporter large permease subunit	99.5	66.7	41.9
MGA_1955	LOCUS_19530	sequence1:2012025..2012510(-)	frameshift		2012054	WP_049769589.1	TRAP transporter large permease subunit	94.4	24.9	28.7
MGA_1977	LOCUS_19750	sequence1:2030890..2031474(-)	partial			WP_011948348.1	TetR family transcriptional regulator	72.2	68.8	24.8
MGA_2005	LOCUS_20030	sequence1:2057559..2058134(-)	partial			WP_005816478.1	nucleotide exchange factor GrpE	80.6	73.7	47.1
MGA_2049	LOCUS_20470	sequence1:2103691..2104410(-)	partial			WP_011948333.1	helix-turn-helix transcriptional regulator	25.9	47.7	61.3
MGA_2056	LOCUS_20540	sequence1:2110747..2111382(-)	partial			WP_011391746.1	cell wall hydrolase	43.6	54.0	39.1
MGA_2060	LOCUS_20580	sequence1:2115749..2118550(-)	partial			WP_022261389.1	InlB B-repeat-containing protein	29.6	81.9	68.8
MGA_2063	LOCUS_20610	sequence1:2120078..2120671(-)	frameshift		2120688,2120691	WP_022261389.1	InlB B-repeat-containing protein	99.0	51.3	54.4
MGA_2064	LOCUS_20620	sequence1:2120677..2122881(-)	frameshift		2120691,2120694	WP_022261389.1	InlB B-repeat-containing protein	19.8	43.0	73.8
MGA_2066	LOCUS_20640	sequence1:2123286..2125466(-)	partial			WP_157860128.1	lectin like domain-containing protein	60.5	66.7	31.1
MGA_2073	LOCUS_20710	sequence1:2132756..2133505(-)	partial			WP_000764065.1	RNA polymerase sigma factor RpoD	98.8	70.4	28.9
MGA_2092	LOCUS_20900	sequence1:2151584..2152336(-)	frameshift		2152373	WP_032709637.1	melibiose:sodium transporter MelB	96.0	51.0	35.0
MGA_2093	LOCUS_20910	sequence1:2152311..2152961(-)	frameshift		2152376	WP_000028114.1	melibiose:sodium transporter MelB	89.8	40.8	47.4
MGA_2094	LOCUS_20920	sequence1:2152975..2153445(-)	partial			WP_000120562.1	beta-glucoside-specific PTS transporter subunit IIABC	85.3	21.6	45.9
MGA_2120	LOCUS_21180	sequence1:2175334..2177778(-)	partial			WP_011704764.1	two-component sensor histidine kinase BarA	60.3	55.4	31.5
MGA_2122	LOCUS_21200	sequence1:2179256..2179912(-)	partial			WP_013389345.1	RICIN domain-containing protein	88.1	23.2	33.3
MGA_2125	LOCUS_21230	sequence1:2183031..2186003(-)	partial			WP_011986503.1	M6 family metalloprotease domain-containing protein	40.2	49.9	29.0
MGA_2135	LOCUS_21330	sequence1:2197513..2198193(-)	partial			WP_010966937.1	L,D-transpeptidase	73.0	57.5	33.3
MGA_2136	LOCUS_21340	sequence1:2198396..2199847(+)	partial			WP_001032628.1	ATP-binding protein	58.6	70.0	26.5
MGA_2138	LOCUS_21360	sequence1:2200436..2201263(-)	partial			WP_134266418.1	N-acetylmuramoyl-L-alanine amidase	81.5	73.2	34.5
MGA_2139	LOCUS_21370	sequence1:2201260..2203782(-)	partial			WP_027480135.1	right-handed parallel beta-helix repeat-containing protein	37.0	30.6	41.0
MGA_2140	LOCUS_21380	sequence1:2203794..2204546(-)	partial			WP_011403857.1	RDD family protein	50.0	52.5	36.9
MGA_2142	LOCUS_21400	sequence1:2205298..2206515(-)	partial			WP_012869463.1	Do family serine endopeptidase	44.9	34.0	30.5
MGA_2143	LOCUS_21410	sequence1:2206531..2207391(-)	partial			WP_000406241.1	Stp1/IreP family PP2C-type Ser/Thr phosphatase	74.1	85.0	32.1
MGA_2148	LOCUS_21460	sequence1:2211773..2212270(-)	partial			WP_011948571.1	beta-glucoside-specific PTS transporter subunit IIABC	87.9	23.1	49.7
MGA_2153	LOCUS_21510	sequence1:2216287..2216835(-)	internal_stop_codon	2216875..2216877(-)		WP_011476682.1	PTS sugar transporter subunit IIC	94.5	64.6	53.5
MGA_2154	LOCUS_21520	sequence1:2216875..2217105(-)	internal_stop_codon	2216875..2216877(-)		WP_011476682.1	PTS sugar transporter subunit IIC	100.0	29.5	59.2
MGA_2194	LOCUS_21900	sequence1:2259835..2260500(+)	partial			WP_000810357.1	DUF3298 and DUF4163 domain-containing protein	87.8	74.9	31.1
MGA_2196	LOCUS_21920	sequence1:2261967..2262332(-)	partial			WP_011861549.1	AraC family transcriptional regulator	89.3	37.4	40.7
MGA_2197	LOCUS_21930	sequence1:2262329..2262661(-)	partial			WP_011861549.1	AraC family transcriptional regulator	93.6	35.6	60.2
MGA_2206	LOCUS_22020	sequence1:2271630..2273975(-)	partial			WP_002289453.1	sigma-54-dependent transcriptional regulator	50.8	44.4	21.1
MGA_2233	LOCUS_22290	sequence1:2299074..2300615(-)	partial			WP_011461023.1	cell wall-binding repeat-containing protein	32.7	20.5	26.3
MGA_2244	LOCUS_22400	sequence1:2310441..2310647(-)	partial			WP_012048143.1	small, acid-soluble spore protein, alpha/beta type	76.5	62.2	58.9
MGA_2267	LOCUS_22630	sequence1:2332518..2333288(-)	partial			WP_011987059.1	polysaccharide deacetylase family protein	76.6	67.7	42.9
MGA_2273	LOCUS_22690	sequence1:2340778..2341524(-)	partial			WP_012048120.1	N-acetylmuramoyl-L-alanine amidase	67.7	18.2	39.1
MGA_2291	LOCUS_22870	sequence1:2356391..2357563(-)	partial			WP_001181201.1	PstS family phosphate ABC transporter substrate-binding protein	81.8	63.3	36.2
MGA_2302	LOCUS_22980	sequence1:2365059..2365739(-)	partial			WP_012775489.1	DUF1700 domain-containing protein	31.0	28.3	40.8
MGA_2313	LOCUS_23090	sequence1:2373899..2374327(+)	partial			WP_011458816.1	GNAT family N-acetyltransferase	72.5	37.1	44.2
MGA_2315	LOCUS_23110	sequence1:2375059..2376360(-)	partial			WP_011861673.1	cell wall-binding glycosyl-hydrolase Cwp19	83.1	49.5	36.4
MGA_2324	LOCUS_23200	sequence1:2385161..2385943(-)	partial			WP_011183409.1	ABC transporter ATP-binding protein	93.1	69.4	50.2
MGA_2357	LOCUS_23530	sequence1:2420594..2421478(+)	partial			WP_011109238.1	AraC family transcriptional regulator	40.5	40.0	35.3
MGA_2424	LOCUS_24200	sequence1:2491368..2494211(-)	partial			WP_022261389.1	InlB B-repeat-containing protein	26.6	75.4	56.3
MGA_2428	LOCUS_24240	sequence1:2500070..2501071(-)	partial			WP_162275130.1	GDSL-type esterase/lipase family protein	73.6	61.8	28.7
MGA_2444	LOCUS_24390	sequence1:2518020..2518433(+)	partial			WP_012544996.1	Rrf2 family transcriptional regulator	63.5	54.3	37.1
MGA_2455	LOCUS_24500	sequence1:2528955..2530634(-)	partial			WP_011263777.1	GGDEF domain-containing protein	26.8	23.6	32.3
MGA_2460	LOCUS_24550	sequence1:2536122..2536862(+)	partial			WP_001044441.1	M23 family metallopeptidase	69.1	57.7	36.5
MGA_2463	LOCUS_24580	sequence1:2541074..2541778(-)	partial			WP_010965345.1	3D domain-containing protein	49.1	20.6	31.0
MGA_2466	LOCUS_24610	sequence1:2543300..2546266(-)	partial			WP_011181491.1	FN3 and LamG domain-containing metallophosphoesterase family protein	67.6	78.6	33.4
MGA_2470	LOCUS_24650	sequence1:2549622..2550422(-)	partial			WP_011948299.1	extracellular solute-binding protein	94.0	40.8	53.6
MGA_2474	LOCUS_24690	sequence1:2552781..2553860(-)	partial			WP_011948299.1	extracellular solute-binding protein	88.9	51.4	37.9
MGA_2479	LOCUS_24740	sequence1:2558140..2558589(-)	partial			WP_012804338.1	PTS sugar transporter subunit IIA	91.9	19.9	38.7
MGA_2488	LOCUS_24830	sequence1:2568238..2569287(-)	partial			WP_002208797.1	PTS fructose transporter subunit IIBC	94.3	57.4	37.4
MGA_2491	LOCUS_24860	sequence1:2570666..2571709(-)	partial			WP_048061266.1	phosphoglycerate dehydrogenase	79.8	53.4	38.2
MGA_2495	LOCUS_24900	sequence1:2576298..2577026(-)	partial			WP_005481361.1	23S rRNA pseudouridine(2604) synthase RluF	93.4	60.4	54.9
MGA_2501	LOCUS_24960	sequence1:2581482..2582774(-)	partial			WP_002355000.1	peptidase C39 family protein	36.0	62.0	26.8
MGA_2502	LOCUS_24970	sequence1:2582840..2585371(-)	partial			WP_010989769.1	SMC family ATPase	78.4	61.2	26.5
MGA_2515	LOCUS_25100	sequence1:2598252..2599163(-)	partial			WP_011986222.1	30S ribosomal protein S1	89.4	69.8	37.7
MGA_2516	LOCUS_25110	sequence1:2599240..2601336(-)	partial			WP_010963725.1	Ig-like domain-containing protein	57.2	47.9	22.8
MGA_2517	LOCUS_25120	sequence1:2601337..2603127(-)	partial			WP_010963726.1	serine/threonine-protein kinase	58.6	56.3	30.7
MGA_2554	LOCUS_25490	sequence1:2634276..2635751(-)	partial			WP_010887814.1	MoxR family ATPase	45.6	62.6	25.1
MGA_2560	LOCUS_25550	sequence1:2640716..2641330(-)	partial			WP_005816849.1	TetR/AcrR family transcriptional regulator	75.5	71.1	36.2
MGA_2597	LOCUS_25920	sequence1:2674989..2675213(-)	frameshift		2675012	WP_013390171.1	DUF3990 domain-containing protein	81.1	37.3	43.3
MGA_2611	LOCUS_26060	sequence1:2689493..2690923(-)	partial			WP_010966809.1	diguanylate cyclase	38.7	53.1	35.5
MGA_2616	LOCUS_26110	sequence1:2694696..2697194(-)	partial			WP_014636419.1	alkaline phosphatase family protein	70.2	69.5	29.5
MGA_2640	LOCUS_26350	sequence1:2725161..2727299(-)	partial			WP_011861512.1	sensor histidine kinase	46.6	47.5	38.6
MGA_2662	LOCUS_26570	sequence1:2746765..2747862(-)	partial			WP_010966939.1	sensor histidine kinase KdpD	70.7	28.3	44.1
MGA_2677	LOCUS_26720	sequence1:2765130..2766419(+)	partial			WP_011860827.1	BlaR1 family beta-lactam sensor/signal transducer	98.8	71.1	42.3
MGA_2679	LOCUS_26740	sequence1:2768638..2770773(+)	partial			WP_011860848.1	bifunctional diguanylate cyclase/phosphodiesterase	63.0	43.4	40.4
MGA_2683	LOCUS_26780	sequence1:2774690..2778457(-)	partial			WP_011861061.1	diguanylate cyclase	57.1	60.5	37.1
MGA_2705	LOCUS_27000	sequence1:2798742..2799107(-)	frameshift		2798716,2798813	WP_012099537.1	PTS glucitol/sorbitol transporter subunit IIB	95.9	34.7	51.7
MGA_2717	LOCUS_27120	sequence1:2808848..2812042(-)	partial			WP_130435197.1	ATP-binding protein	35.2	51.1	39.6
MGA_2721	LOCUS_27160	sequence1:2814619..2816805(-)	partial			WP_130435197.1	ATP-binding protein	52.3	53.9	37.8
MGA_2733	LOCUS_27280	sequence1:2828030..2828470(-)	partial			WP_009994768.1	helix-turn-helix domain-containing protein	56.8	17.0	63.9
MGA_2734	LOCUS_27290	sequence1:2828568..2828801(+)	internal_stop_codon	2829033..2829035(+),2828799..2828801(+)		WP_000301254.1	recombinase family protein	97.4	14.3	70.7
MGA_2735	LOCUS_27300	sequence1:2828811..2829035(+)	internal_stop_codon	2829123..2829125(+),2829033..2829035(+),2828799..2828801(+)		WP_000301254.1	recombinase family protein	74.3	10.5	78.2
MGA_2736	LOCUS_27310	sequence1:2829573..2829974(+)	internal_stop_codon	2829543..2829545(+),2829471..2829473(+),2829330..2829332(+)		WP_000301254.1	recombinase family protein	98.5	25.0	42.0
MGA_2738	LOCUS_27330	sequence1:2832039..2832605(-)	internal_stop_codon	2832039..2832041(-),2832618..2832620(-)		WP_002681377.1	virulence RhuM family protein	98.9	54.9	72.6
MGA_2739	LOCUS_27340	sequence1:2832618..2832971(-)	internal_stop_codon	2832618..2832620(-)		WP_011108603.1	virulence RhuM family protein	90.6	32.2	56.9
MGA_2740	LOCUS_27350	sequence1:2832987..2837543(-)	partial			WP_146477260.1	ATP-binding protein	19.7	19.2	25.0
MGA_2751	LOCUS_27460	sequence1:2846961..2849966(-)	partial			WP_010965407.1	Ig domain-containing protein	7.8	17.8	44.9
MGA_2768	LOCUS_27630	sequence1:2867727..2868749(-)	partial			WP_010989346.1	alpha/beta hydrolase	76.2	70.4	36.3
MGA_2772	LOCUS_27670	sequence1:2872312..2872761(-)	partial			WP_003702191.1	mannose/fructose/sorbose PTS transporter subunit IIB	81.2	37.6	37.9
MGA_2775	LOCUS_27700	sequence1:2874510..2876921(-)	partial			WP_011101845.1	glycyl radical protein	74.5	78.1	34.0
MGA_2791	LOCUS_27860	sequence1:2890737..2892251(-)	partial			WP_009897032.1	bifunctional diguanylate cyclase/phosphodiesterase	60.7	63.3	33.5
MGA_2796	LOCUS_27910	sequence1:2895781..2896905(-)	partial			WP_012048018.1	D-alanyl-D-alanine carboxypeptidase family protein	82.1	70.6	39.2
MGA_2797	LOCUS_27920	sequence1:2896925..2898052(-)	partial			WP_011948155.1	DUF5050 domain-containing protein	66.4	50.7	24.3
MGA_2803	LOCUS_27980	sequence1:2902180..2904765(-)	internal_stop_codon	2902180..2902182(-)		WP_022261389.1	InlB B-repeat-containing protein	33.1	83.7	47.4
MGA_2824	LOCUS_28190	sequence1:2922432..2923211(-)	partial			WP_015942796.1	InlB B-repeat-containing protein	72.2	12.7	30.0
MGA_2841	LOCUS_28360	sequence1:2944087..2947779(+)	partial			WP_004454973.1	EAL domain-containing protein	36.3	58.5	36.2
MGA_2861	LOCUS_28560	sequence1:2965850..2966299(-)	frameshift,internal_stop_codon	2966389..2966391(-),2966317..2966319(-),2966386..2966388(-)	2966370	WP_011861805.1	PTS fructose transporter subunit IIABC	96.0	22.4	50.3
MGA_2862	LOCUS_28570	sequence1:2966389..2967774(-)	frameshift,internal_stop_codon	2966389..2966391(-),2966317..2966319(-),2966386..2966388(-)	2966376	WP_011861805.1	PTS fructose transporter subunit IIABC	99.1	71.2	66.7
MGA_2874	LOCUS_28690	sequence1:2977724..2978131(-)	partial			WP_003700744.1	PTS sugar transporter subunit IIB	92.6	38.3	39.4
MGA_2881	LOCUS_28760	sequence1:2984839..2985738(-)	partial			WP_011263669.1	helix-turn-helix domain-containing protein	26.8	28.0	33.3
MGA_2887	LOCUS_28820	sequence1:2990493..2991602(-)	partial			WP_010880241.1	GGDEF domain-containing protein	56.4	81.7	33.8
MGA_2896	LOCUS_28910	sequence1:2999622..3000884(+)	partial			WP_009898049.1	GGDEF domain-containing protein	94.8	53.2	40.3
MGA_2898	LOCUS_28930	sequence1:3001292..3001915(-)	partial			WP_003973362.1	DUF4190 domain-containing protein	44.0	42.0	37.5
MGA_2904	LOCUS_28990	sequence1:3005285..3006082(-)	partial			WP_013363043.1	glycerophosphodiester phosphodiesterase family protein	83.0	72.3	35.2
MGA_2908	LOCUS_29030	sequence1:3009671..3010393(-)	partial			WP_000578803.1	DUF975 family protein	76.2	74.5	27.0
MGA_2914	LOCUS_29090	sequence1:3015208..3015912(-)	partial			WP_004081285.1	DNA polymerase III subunit alpha	68.8	12.1	38.6
MGA_2919	LOCUS_29140	sequence1:3020979..3022871(+)	partial			WP_010989971.1	YhgE/Pip domain-containing protein	84.8	58.5	23.3
MGA_2928	LOCUS_29230	sequence1:3031581..3035720(-)	partial			WP_012256205.1	right-handed parallel beta-helix repeat-containing protein	22.4	39.4	29.7
MGA_2937	LOCUS_29320	sequence1:3039971..3041008(-)	partial			WP_005456652.1	CpaF family protein	82.9	60.5	30.7
MGA_2953	LOCUS_29470	sequence1:3054188..3055585(-)	partial			WP_003243026.1	stage II sporulation protein E	96.1	55.5	26.9
MGA_2968	LOCUS_29620	sequence1:3066124..3073317(-)	partial			WP_006037763.1	RHS repeat-associated core domain-containing protein	47.9	57.0	22.9
MGA_2970	LOCUS_29640	sequence1:3074023..3075429(-)	partial			WP_010966707.1	M56 family metallopeptidase	47.6	41.8	26.3
MGA_2971	LOCUS_29650	sequence1:3075445..3076848(-)	partial			WP_010966707.1	M56 family metallopeptidase	36.2	32.3	31.3
MGA_2983	LOCUS_29770	sequence1:3085419..3085898(-)	partial			WP_011391637.1	spore cortex biosynthesis protein YabQ	54.1	54.4	33.7
MGA_2987	LOCUS_29810	sequence1:3086946..3087374(-)	partial			WP_011458939.1	nucleoside triphosphate pyrophosphohydrolase	81.0	23.3	56.5
MGA_2989	LOCUS_29830	sequence1:3088330..3089247(+)	partial			WP_011203662.1	type II CAAX endopeptidase family protein	42.0	53.8	32.6
MGA_2991	LOCUS_29850	sequence1:3090176..3090940(-)	partial			WP_005788900.1	glycoside hydrolase family 25 protein	77.6	64.9	26.8
MGA_2993	LOCUS_29870	sequence1:3091762..3092985(-)	partial			WP_010989463.1	GW domain-containing class 2 internalin InlB	19.2	11.7	40.5
MGA_3011	LOCUS_30050	sequence1:3111073..3112221(-)	partial			WP_011861349.1	PAS domain-containing protein	78.5	27.1	32.6
MGA_3063	LOCUS_30570	sequence1:3162650..3163612(-)	partial			WP_002681035.1	KHG/KDPG aldolase/sugar kinase fusion protein	85.9	45.4	41.8
MGA_3079	LOCUS_30730	sequence1:3177918..3178529(-)	partial			WP_010880658.1	TetR/AcrR family transcriptional regulator	60.1	63.7	29.5
MGA_3097	LOCUS_30910	sequence1:3196078..3196512(-)	frameshift		3196089	WP_002356030.1	mannose/fructose/sorbose PTS transporter subunit IIA	86.8	38.5	37.0
MGA_3107	LOCUS_31010	sequence1:3205784..3206839(-)	partial			WP_012582463.1	phosphoglycerate dehydrogenase	80.9	53.7	38.9
MGA_3112	LOCUS_31060	sequence1:3209692..3210417(-)	partial			WP_003722867.1	phosphoenolpyruvate--protein phosphotransferase	85.5	36.0	38.5
MGA_3136	LOCUS_31280	sequence1:3236826..3237062(+)	frameshift		3236833	WP_002682183.1	ABC transporter ATP-binding protein	82.1	11.0	60.9
MGA_3138	LOCUS_31300	sequence1:3237871..3238101(-)	partial			WP_010964778.1	metal-dependent transcriptional regulator	82.9	52.5	51.6
MGA_3147	LOCUS_31390	sequence1:3253330..3256176(-)	internal_stop_codon	3256258..3256260(-)		WP_011460625.1	non-ribosomal peptide synthetase	99.2	82.6	38.8
MGA_3148	LOCUS_31400	sequence1:3256258..3256737(-)	internal_stop_codon	3256258..3256260(-)		WP_011460625.1	non-ribosomal peptide synthetase	81.1	11.7	38.2
MGA_3152	LOCUS_31440	sequence1:3259779..3260102(-)	partial			WP_011860797.1	energy-coupling factor transporter transmembrane component T	97.2	45.2	50.0
MGA_3163	LOCUS_31550	sequence1:3271436..3272770(-)	partial			WP_002324544.1	site-specific resolvase TndX	83.1	68.9	27.7
MGA_3179	LOCUS_31710	sequence1:3287940..3291503(+)	partial			WP_011861107.1	YodL domain-containing protein	50.9	43.2	53.8
MGA_3196	LOCUS_31880	sequence1:3303519..3303881(-)	partial			WP_011393327.1	helix-turn-helix transcriptional regulator	43.3	20.6	46.2
MGA_3219	LOCUS_32110	sequence1:3321920..3327181(-)	partial			WP_010774229.1	DEAD/DEAH box helicase family protein	74.1	41.0	47.8
MGA_3223	LOCUS_32150	sequence1:3329608..3331602(-)	partial			WP_011458832.1	peptidoglycan DD-metalloendopeptidase family protein	20.6	27.3	45.7
MGA_3227	LOCUS_32190	sequence1:3333289..3334137(-)	partial			WP_011392073.1	DNA repair protein RadC	44.7	55.0	47.6
MGA_3239	LOCUS_32310	sequence1:3343111..3344058(-)	partial			WP_011861117.1	type IV secretory system conjugative DNA transfer family protein	41.6	22.0	35.9
MGA_3240	LOCUS_32320	sequence1:3344725..3346017(-)	partial			WP_011860784.1	type IV secretory system conjugative DNA transfer family protein	90.9	63.5	39.2
MGA_3254	LOCUS_32460	sequence1:3356183..3357697(-)	partial			WP_004399270.1	DNA (cytosine-5-)-methyltransferase	56.2	67.9	35.1
MGA_3263	LOCUS_32550	sequence1:3365528..3366532(-)	partial			WP_041272161.1	DUF3991 and toprim domain-containing protein	92.5	62.3	34.1
MGA_3266	LOCUS_32580	sequence1:3368162..3369022(-)	partial			WP_011763533.1	phosphoadenosine phosphosulfate reductase family protein	83.9	36.3	30.0
MGA_3269	LOCUS_32610	sequence1:3370275..3371540(-)	partial			WP_011462010.1	hypothetical protein	98.8	73.2	62.7
MGA_3289	LOCUS_32810	sequence1:3383886..3384971(-)	partial			WP_002287693.1	hypothetical protein	28.0	35.1	46.6
MGA_3305	LOCUS_32970	sequence1:3398432..3398578(-)	frameshift,internal_stop_codon	3398755..3398757(-)	3398443,3398733,3398678	WP_002298157.1	IS256 family transposase	97.9	10.9	68.1
MGA_3306	LOCUS_32980	sequence1:3398759..3399070(-)	frameshift,internal_stop_codon	3399222..3399224(-),3398754..3398756(-),3399170..3399172(-),3399074..3399076(-)	3399185,3399251,3398889,3398677,3399049,3398732	WP_002298157.1	IS256 family transposase	51.5	12.3	73.6
MGA_3321	LOCUS_33130	sequence1:3411824..3413401(-)	frameshift,internal_stop_codon	3413417..3413419(-)	3413447	WP_048146532.1	FAD-dependent oxidoreductase	65.1	72.2	48.6
MGA_3338	LOCUS_33300	sequence1:3427964..3428983(-)	partial			WP_011015830.1	NUDIX domain-containing protein	50.4	68.7	49.1
MGA_3349	LOCUS_33410	sequence1:3435546..3436181(-)	partial			WP_021365081.1	endonuclease III	93.8	50.4	42.9
MGA_3351	LOCUS_33430	sequence1:3436765..3437622(-)	partial			WP_011088970.1	subclass B3 metallo-beta-lactamase BJP-1	73.3	69.4	30.5
MGA_3373	LOCUS_33650	sequence1:3459699..3460130(+)	frameshift		3459715	WP_015704601.1	UbiD family decarboxylase	86.7	25.1	70.2
MGA_3378	LOCUS_33700	sequence1:3462669..3463517(+)	partial			WP_011861580.1	VanZ family protein	42.2	55.4	44.0
MGA_3391	LOCUS_33830	sequence1:3475688..3476689(+)	partial			WP_011388634.1	AraC family transcriptional regulator	44.7	39.8	31.5
MGA_3392	LOCUS_33840	sequence1:3476782..3477237(+)	partial			WP_011068502.1	DUF805 domain-containing protein	71.5	28.0	36.4
MGA_3394	LOCUS_33860	sequence1:3477944..3478093(-)	partial			WP_003423115.1	fructose-6-phosphate aldolase	83.7	19.0	75.6
MGA_3408	LOCUS_34000	sequence1:3491984..3496063(-)	partial			WP_010990018.1	SpaA isopeptide-forming pilin-related protein	47.2	40.8	26.3
MGA_3416	LOCUS_34080	sequence1:3501452..3502735(-)	partial			WP_005903647.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	97.9	55.6	35.2
MGA_3437	LOCUS_34270	sequence1:3526954..3529335(-)	partial			WP_000381159.1	DNA repair exonuclease	43.0	82.2	27.2
MGA_3474	LOCUS_34640	sequence1:3565612..3567135(+)	partial			WP_003246695.1	mannitol operon transcriptional activator MtlR	100.0	73.5	28.8
