# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_49	LOCUS_00490	sequence1:50526..51362(-)	internal_stop_codon	51405..51407(-)		WP_143257291.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	100.0	23.3	86.0
MGA_50	LOCUS_00500	sequence1:51405..54110(-)	internal_stop_codon	51405..51407(-)		WP_143257291.1	glycoside hydrolase family 2 TIM barrel-domain containing protein	100.0	75.5	91.8
MGA_168	LOCUS_01680	sequence1:189712..190746(-)	frameshift		190946	WP_164996215.1	RNA-directed DNA polymerase	88.4	67.9	56.1
MGA_175	LOCUS_01750	sequence1:200197..200391(-)	internal_stop_codon	200401..200403(-)		WP_013547326.1	site-specific integrase	93.8	15.0	86.7
MGA_176	LOCUS_01760	sequence1:200401..201399(-)	internal_stop_codon	200401..200403(-)		WP_013548084.1	site-specific integrase	100.0	83.0	75.0
MGA_189	LOCUS_01890	sequence1:220803..221666(+)	partial			WP_102408502.1	site-specific integrase	89.2	63.1	94.9
MGA_199	LOCUS_01990	sequence1:228517..228753(+)	partial			WP_011107746.1	type 1 glutamine amidotransferase family protein	92.3	36.5	56.9
MGA_295	LOCUS_02950	sequence1:362566..363987(-)	frameshift		364112	WP_224207243.1	hypothetical protein	99.8	48.8	81.6
MGA_296	LOCUS_02960	sequence1:364110..365456(-)	frameshift		364112	WP_224207243.1	hypothetical protein	100.0	46.8	71.7
MGA_318	LOCUS_03180	sequence1:391938..392135(+)	internal_stop_codon	391935..391937(+)		WP_004295307.1	helix-turn-helix domain-containing protein	70.8	44.7	65.2
MGA_333	LOCUS_03330	sequence1:408662..409348(-)	partial			WP_029425032.1	site-specific integrase	97.8	71.2	93.3
MGA_426	LOCUS_04260	sequence1:527957..528460(+)	frameshift		528385	WP_165601832.1	hypothetical protein	85.6	38.7	88.3
MGA_427	LOCUS_04270	sequence1:528454..529116(+)	frameshift,internal_stop_codon	529115..529117(+)	528385	WP_165601832.1	hypothetical protein	100.0	58.7	94.5
MGA_438	LOCUS_04380	sequence1:536929..537243(-)	internal_stop_codon	537310..537312(-)		WP_004310171.1	hypothetical protein	95.2	49.7	58.6
MGA_439	LOCUS_04390	sequence1:537310..537489(-)	internal_stop_codon	537310..537312(-)		WP_004310171.1	hypothetical protein	94.9	28.1	73.2
MGA_478	LOCUS_04780	sequence1:592708..592977(-)	frameshift		593097,593037	WP_165034429.1	tyrosine-type recombinase/integrase	70.8	14.1	48.4
MGA_498	LOCUS_04980	sequence1:608617..609285(+)	partial			WP_011108430.1	site-specific integrase	100.0	55.1	100.0
MGA_841	LOCUS_08400	sequence1:1086757..1086996(-)	partial			WP_011202295.1	helix-turn-helix transcriptional regulator	68.4	67.5	61.1
MGA_881	LOCUS_08800	sequence1:1154256..1154633(-)	partial			WP_004298459.1	hypothetical protein	56.8	67.0	78.9
MGA_988	LOCUS_09870	sequence1:1320430..1320756(-)	partial			WP_011108517.1	two-component regulator propeller domain-containing protein	81.5	6.6	68.2
MGA_1039	LOCUS_10380	sequence1:1400577..1400957(+)	internal_stop_codon	1400955..1400957(+)		WP_011108702.1	DUF6443 domain-containing protein	100.0	9.4	93.7
MGA_1040	LOCUS_10390	sequence1:1401018..1401752(+)	internal_stop_codon	1400955..1400957(+)		WP_007757189.1	JAB-like toxin 1 domain-containing protein	99.2	71.8	65.7
MGA_1045	LOCUS_10440	sequence1:1404589..1404750(+)	frameshift,internal_stop_codon	1404748..1404750(+),1404799..1404801(+)	1404834	WP_011108534.1	hypothetical protein	100.0	14.0	71.7
MGA_1127	LOCUS_11260	sequence1:1512167..1512799(-)	partial			WP_011108744.1	DMT family transporter	100.0	72.9	96.7
MGA_1247	LOCUS_12460	sequence1:1695162..1695530(-)	partial			WP_011201924.1	alpha-galactosidase	52.5	8.9	67.2
MGA_1261	LOCUS_12600	sequence1:1719378..1719794(+)	partial			WP_008767622.1	O-antigen ligase family protein	100.0	25.7	96.4
MGA_1266	LOCUS_12650	sequence1:1723927..1724145(-)	partial			WP_010536539.1	tyrosine-type DNA invertase cluster 3b	56.9	13.0	78.0
MGA_1310	LOCUS_13090	sequence1:1782711..1783235(-)	partial			WP_011108848.1	glutaminase family protein	100.0	20.7	99.4
MGA_1319	LOCUS_13180	sequence1:1795726..1796526(-)	partial			WP_011108849.1	IPT/TIG domain-containing protein	100.0	53.8	100.0
MGA_1364	LOCUS_13630	sequence1:1872046..1872999(-)	partial			WP_008767165.1	O-antigen ligase family protein	100.0	59.0	98.4
MGA_1371	LOCUS_13700	sequence1:1879757..1880104(+)	internal_stop_codon	1880102..1880104(+)		WP_011202019.1	hypothetical protein	96.5	15.9	40.5
MGA_1372	LOCUS_13710	sequence1:1880114..1881682(+)	internal_stop_codon	1880102..1880104(+)		WP_032555800.1	transglutaminase domain-containing protein	99.8	78.7	45.9
MGA_1374	LOCUS_13730	sequence1:1883937..1884479(+)	partial			WP_008767151.1	O-antigen ligase family protein	100.0	34.0	100.0
MGA_1386	LOCUS_13850	sequence1:1901352..1901690(-)	partial			WP_011108882.1	transposase	100.0	24.8	100.0
MGA_1646	LOCUS_16450	sequence1:2275817..2276209(-)	partial			WP_008766919.1	hypothetical protein	100.0	73.9	96.2
MGA_1703	LOCUS_17020	sequence1:2353819..2354400(+)	partial			WP_055271316.1	DUF5686 and carboxypeptidase regulatory-like domain-containing protein	86.0	19.1	94.0
MGA_1704	LOCUS_17030	sequence1:2354327..2355499(+)	partial			WP_055271316.1	DUF5686 and carboxypeptidase regulatory-like domain-containing protein	100.0	44.9	86.9
MGA_1791	LOCUS_17900	sequence1:2472400..2472783(-)	partial			WP_011109047.1	hypothetical protein	100.0	53.4	100.0
MGA_1845	LOCUS_18430	sequence1:2541650..2541865(+)	partial			WP_011109072.1	tyrosine-type recombinase/integrase	100.0	60.2	100.0
MGA_1964	LOCUS_19620	sequence1:2739632..2740297(+)	partial			WP_011109128.1	GyrI-like domain-containing protein	100.0	58.9	99.5
MGA_1970	LOCUS_19680	sequence1:2747575..2749050(-)	partial			WP_002303183.1	glycosyl hydrolase family 28 protein	74.5	83.0	35.8
MGA_2020	LOCUS_20180	sequence1:2836658..2838157(+)	partial			WP_008764411.1	M56 family metallopeptidase	100.0	70.3	99.8
MGA_2052	LOCUS_20500	sequence1:2873776..2873925(+)	partial			WP_008766756.1	type II toxin-antitoxin system RelE/ParE family toxin	95.9	42.7	70.2
MGA_2358	LOCUS_23560	sequence1:3263652..3264209(-)	partial			WP_011109322.1	restriction endonuclease subunit S	99.5	48.3	100.0
MGA_2430	LOCUS_24280	sequence1:3344839..3345066(+)	partial			WP_011109344.1	helix-turn-helix domain-containing protein	100.0	41.4	100.0
MGA_2434	LOCUS_24320	sequence1:3347540..3349342(+)	partial			WP_008769774.1	DUF3987 domain-containing protein	79.0	59.4	28.5
MGA_2440	LOCUS_24380	sequence1:3353240..3354037(-)	partial			WP_011109348.1	Eco57I restriction-modification methylase domain-containing protein	100.0	26.7	98.5
MGA_2441	LOCUS_24390	sequence1:3354283..3357444(-)	partial			WP_011109348.1	Eco57I restriction-modification methylase domain-containing protein	74.2	78.8	86.3
MGA_2562	LOCUS_25600	sequence1:3536669..3536848(-)	internal_stop_codon	3536669..3536671(-)		WP_004291462.1	N-6 DNA methylase	94.9	3.0	51.7
MGA_2572	LOCUS_25700	sequence1:3548118..3548366(-)	internal_stop_codon	3548376..3548378(-)		WP_007216065.1	conjugal transfer protein MobA	97.6	55.2	52.5
MGA_2586	LOCUS_25840	sequence1:3556790..3557203(+)	internal_stop_codon	3556730..3556732(+)		WP_070612845.1	DUF4141 domain-containing protein	100.0	65.6	97.1
MGA_2588	LOCUS_25860	sequence1:3558450..3558899(+)	internal_stop_codon	3558381..3558383(+)		WP_117508569.1	conjugative transposon protein TraK	100.0	72.0	69.8
MGA_2603	LOCUS_26010	sequence1:3572991..3574070(+)	partial			WP_008766765.1	FecR family protein	65.7	71.4	29.0
MGA_2615	LOCUS_26130	sequence1:3586302..3587021(+)	partial			WP_018339507.1	hypothetical protein	41.0	45.6	36.4
MGA_2624	LOCUS_26220	sequence1:3595808..3596266(+)	frameshift		3596488,3596227	WP_025868038.1	DUF6047 family protein	94.1	55.8	63.9
MGA_2625	LOCUS_26230	sequence1:3596263..3596502(+)	frameshift		3596488,3596227	WP_025868038.1	DUF6047 family protein	97.5	29.8	83.1
MGA_2627	LOCUS_26250	sequence1:3597699..3598064(-)	frameshift,internal_stop_codon	3598044..3598046(-)	3598022,3598190	WP_075966485.1	IS256 family transposase	89.3	26.7	92.6
MGA_2628	LOCUS_26260	sequence1:3598074..3598610(-)	frameshift,internal_stop_codon	3598634..3598636(-),3598043..3598045(-)	3598192,3598834,3598027	WP_075966485.1	IS256 family transposase	99.4	41.0	74.6
MGA_2629	LOCUS_26270	sequence1:3598635..3598808(-)	frameshift,internal_stop_codon	3598634..3598636(-)	3598834	WP_075966485.1	IS256 family transposase	100.0	14.1	91.2
MGA_2630	LOCUS_26280	sequence1:3599034..3599456(-)	frameshift,internal_stop_codon	3599642..3599644(-),3599531..3599533(-)	3599482,3599087	WP_077152662.1	IS1182 family transposase	70.7	17.9	93.9
MGA_2631	LOCUS_26290	sequence1:3599642..3600178(-)	frameshift,internal_stop_codon	3599642..3599644(-),3599531..3599533(-)	3599482,3600140	WP_077152662.1	IS1182 family transposase	93.3	30.0	91.6
MGA_2669	LOCUS_26670	sequence1:3644190..3644456(+)	frameshift		3644396	WP_011107081.1	hypothetical protein	83.0	45.9	87.7
MGA_2671	LOCUS_26690	sequence1:3644955..3645836(-)	frameshift		3645841	WP_009129703.1	IS1182 family transposase	100.0	59.6	97.3
MGA_2860	LOCUS_28580	sequence1:3871296..3872807(+)	frameshift		3871269	WP_007753560.1	DUF5695 domain-containing protein	100.0	72.5	78.9
MGA_2910	LOCUS_29080	sequence1:3957000..3958289(+)	partial			WP_008766149.1	hypothetical protein	37.8	36.2	95.1
MGA_2988	LOCUS_29860	sequence1:4063625..4064215(+)	partial			WP_011107246.1	glycosyltransferase family 4 protein	100.0	59.6	95.4
MGA_3045	LOCUS_30430	sequence1:4134966..4135412(-)	partial			WP_008766062.1	sugar porter family MFS transporter	100.0	31.6	93.2
MGA_3060	LOCUS_30580	sequence1:4158696..4159619(+)	partial			WP_008766017.1	O-antigen polymerase	100.0	73.1	98.7
MGA_3089	LOCUS_30870	sequence1:4195272..4195523(+)	partial			WP_005787364.1	hypothetical protein	56.6	17.6	59.3
MGA_3199	LOCUS_31970	sequence1:4333077..4333238(+)	frameshift		4333050,4332959	WP_048692555.1	mannose-1-phosphate guanylyltransferase	90.6	13.8	54.2
MGA_3231	LOCUS_32290	sequence1:4365573..4365806(-)	partial			WP_008765519.1	DUF4858 domain-containing protein	100.0	37.0	100.0
MGA_3255	LOCUS_32530	sequence1:4395406..4396344(+)	partial			WP_011107383.1	O-antigen ligase family protein	100.0	52.2	93.6
MGA_3352	LOCUS_33500	sequence1:4524116..4524295(-)	partial			WP_149944646.1	hypothetical protein	96.6	35.2	71.9
MGA_3627	LOCUS_36250	sequence1:4868872..4869057(-)	frameshift		4869062	WP_016274874.1	hypothetical protein	100.0	58.1	72.1
MGA_3691	LOCUS_36890	sequence1:4958555..4958896(-)	partial			WP_008765860.1	heavy-metal-associated domain-containing protein	77.9	73.9	97.7
MGA_3692	LOCUS_36900	sequence1:4958938..4960041(-)	partial			WP_055269995.1	TonB-dependent receptor	99.7	49.5	96.4
MGA_3697	LOCUS_36950	sequence1:4962317..4962529(-)	frameshift		4962546	WP_008628599.1	helix-turn-helix domain-containing protein	90.0	61.2	66.7
MGA_3698	LOCUS_36960	sequence1:4962713..4962883(+)	partial			WP_009292463.1	Ppx/GppA family phosphatase	100.0	18.4	60.7
MGA_3712	LOCUS_37100	sequence1:4977168..4977593(+)	frameshift,internal_stop_codon	4977141..4977143(+)	4977416,4977731	WP_200755826.1	site-specific integrase	58.9	20.3	89.2
MGA_3713	LOCUS_37110	sequence1:4977485..4977814(+)	frameshift		4977416,4978025,4977731	WP_200755826.1	site-specific integrase	96.3	25.4	72.4
MGA_3714	LOCUS_37120	sequence1:4977796..4978026(+)	frameshift		4978024,4977733	WP_200755826.1	site-specific integrase	100.0	18.6	89.5
MGA_3715	LOCUS_37130	sequence1:4978112..4978564(-)	frameshift		4978610	WP_004295290.1	flavodoxin	100.0	83.8	99.3
MGA_3737	LOCUS_37350	sequence1:5001689..5002747(-)	partial			WP_055269995.1	TonB-dependent receptor	94.3	44.9	94.6
MGA_3772	LOCUS_37700	sequence1:5041089..5041394(+)	partial			WP_008765888.1	helix-turn-helix transcriptional regulator	100.0	68.7	100.0
MGA_3786	LOCUS_37840	sequence1:5062392..5062850(+)	frameshift		5062258	WP_011203319.1	GyrI-like domain-containing protein	100.0	39.8	52.0
MGA_3792	LOCUS_37900	sequence1:5068707..5069357(+)	partial			WP_008765906.1	OmpA family protein	81.9	74.4	96.6
MGA_3805	LOCUS_38030	sequence1:5082712..5082987(+)	partial			WP_008765917.1	DUF805 domain-containing protein	100.0	72.2	100.0
MGA_3855	LOCUS_38530	sequence1:5143299..5143967(+)	frameshift		5143940	WP_011084771.1	S9 family peptidase	94.1	27.3	31.2
MGA_3856	LOCUS_38540	sequence1:5143988..5145532(+)	frameshift		5143940	WP_013533398.1	S9 family peptidase	99.4	67.0	49.0
MGA_3987	LOCUS_39850	sequence1:5297488..5297841(-)	partial			WP_195435952.1	ATP-binding protein	100.0	21.8	92.3
MGA_4181	LOCUS_41790	sequence1:5528699..5528875(-)	partial			WP_011107879.1	hypothetical protein	100.0	73.4	100.0
MGA_4228	LOCUS_42260	sequence1:5605606..5605755(-)	frameshift		5605623	WP_235016781.1	hypothetical protein	89.8	46.8	63.6
MGA_4302	LOCUS_43000	sequence1:5684685..5685179(-)	partial			WP_011107949.1	EpsG family protein	100.0	44.3	100.0
MGA_4380	LOCUS_43780	sequence1:5813858..5814082(+)	partial			WP_011107979.1	DUF4907 domain-containing protein	100.0	65.5	100.0
MGA_4411	LOCUS_44090	sequence1:5859136..5860296(+)	partial			WP_005789735.1	thiamine pyrophosphate-binding protein	91.7	61.1	81.9
MGA_4413	LOCUS_44110	sequence1:5861586..5862272(+)	partial			WP_005789735.1	thiamine pyrophosphate-binding protein	99.6	39.2	91.2
MGA_4510	LOCUS_45080	sequence1:5993387..5993563(-)	partial			WP_011107984.1	site-specific integrase	100.0	18.4	96.6
MGA_4516	LOCUS_45140	sequence1:6001969..6002241(+)	partial			WP_072530700.1	IS256 family transposase	68.9	15.1	96.8
MGA_4540	LOCUS_45380	sequence1:6035075..6035713(-)	internal_stop_codon	6035798..6035800(-)		WP_011203113.1	phage integrase SAM-like domain-containing protein	100.0	71.4	99.5
MGA_4541	LOCUS_45390	sequence1:6035798..6035968(-)	internal_stop_codon	6035798..6035800(-)		WP_011203113.1	phage integrase SAM-like domain-containing protein	100.0	18.9	98.2
MGA_4542	LOCUS_45400	sequence1:6036398..6037084(-)	partial			WP_011107984.1	site-specific integrase	97.8	70.8	97.8
MGA_4605	LOCUS_46030	sequence1:6116570..6116863(+)	partial			WP_008765097.1	SH3 beta-barrel fold-containing protein	76.3	61.2	33.8
MGA_4611	LOCUS_46090	sequence1:6122066..6122287(-)	partial			WP_005813423.1	SusC/RagA family TonB-linked outer membrane protein	98.6	6.8	69.4
MGA_4747	LOCUS_47450	sequence2:21479..22045(+)	partial			WP_008760911.1	M23 family metallopeptidase	71.3	42.2	42.6
MGA_4757	LOCUS_47550	sequence2:28217..28756(+)	partial			WP_080707197.1	DUF3575 domain-containing protein	100.0	39.2	97.8
