{ "tc_result": [ { "organism_name": "Microbacterium halimionae", "strain": "strain=DSM 27576", "accession": "GCA_014137985.1", "taxid": 1526413, "species_taxid": 1526413, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 971, "total_fragments": 972, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbacterium halimionae", "strain": "strain=CECT 8593", "accession": "GCA_011761265.1", "taxid": 1526413, "species_taxid": 1526413, "relation_to_type": "type", "validated": true, "ani": 99.9982, "matched_fragments": 967, "total_fragments": 972, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Microbacterium endophyticum", "strain": "strain=DSM 27099", "accession": "GCA_011047135.1", "taxid": 1526412, "species_taxid": 1526412, "relation_to_type": "type", "validated": true, "ani": 85.7865, "matched_fragments": 730, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium endophyticum", "strain": "strain=DSM 27099", "accession": "GCA_014191465.1", "taxid": 1526412, "species_taxid": 1526412, "relation_to_type": "type", "validated": true, "ani": 85.7582, "matched_fragments": 723, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium endophyticum", "strain": "strain=CECT 8354", "accession": "GCA_011761445.1", "taxid": 1526412, "species_taxid": 1526412, "relation_to_type": "type", "validated": true, "ani": 85.714, "matched_fragments": 734, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium cremeum", "strain": "strain=NY27", "accession": "GCA_015277855.1", "taxid": 2782169, "species_taxid": 2782169, "relation_to_type": "type", "validated": true, "ani": 78.0145, "matched_fragments": 255, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium commune", "strain": "strain=Re1", "accession": "GCA_014836945.1", "taxid": 2762219, "species_taxid": 2762219, "relation_to_type": "type", "validated": true, "ani": 77.9558, "matched_fragments": 164, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium invictum", "strain": "strain=JCM 17023", "accession": "GCA_015278285.1", "taxid": 515415, "species_taxid": 515415, "relation_to_type": "type", "validated": true, "ani": 77.8313, "matched_fragments": 222, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ginsengiterrae", "strain": "strain=DSM 24823", "accession": "GCA_014205075.1", "taxid": 546115, "species_taxid": 546115, "relation_to_type": "type", "validated": true, "ani": 77.8185, "matched_fragments": 162, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium invictum", "strain": "strain=DSM 19600", "accession": "GCA_023155715.1", "taxid": 515415, "species_taxid": 515415, "relation_to_type": "type", "validated": true, "ani": 77.8093, "matched_fragments": 225, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium gallinarum", "strain": "strain=Sa1CUA4", "accession": "GCA_014837165.1", "taxid": 2762209, "species_taxid": 2762209, "relation_to_type": "type", "validated": true, "ani": 77.7616, "matched_fragments": 244, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbacterium ginsengiterrae", "strain": "strain=JCM 15516", "accession": "GCA_015278215.1", "taxid": 546115, "species_taxid": 546115, "relation_to_type": "type", "validated": true, "ani": 77.507, "matched_fragments": 162, "total_fragments": 972, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_011761265.1", "gtdb_species": "s__Microbacterium halimionae", "ani": 99.9982, "matched_fragments": 967, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_011047135.1", "gtdb_species": "s__Microbacterium endophyticum", "ani": 85.7865, "matched_fragments": 730, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "0.99", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_000799385.1", "gtdb_species": 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sp006715145", "ani": 78.1393, "matched_fragments": 224, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_013282805.1", "gtdb_species": "s__Microbacterium hominis_B", "ani": 78.0176, "matched_fragments": 262, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003386735.1", "gtdb_species": "s__Microbacterium trichothecenolyticum_A", "ani": 77.9912, "matched_fragments": 278, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003095395.1", "gtdb_species": "s__Microbacterium sp003095395", "ani": 77.9764, "matched_fragments": 237, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001456955.1", "gtdb_species": "s__Microbacterium enclense", "ani": 77.9608, "matched_fragments": 238, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.78", "min_intra_species_ani": "97.57", "mean_intra_species_af": "0.95", "min_intra_species_af": "0.89", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_014201255.1", "gtdb_species": "s__Microbacterium sp014201255", "ani": 77.9561, "matched_fragments": 195, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012847295.1", "gtdb_species": "s__Microbacterium sp012847295", "ani": 77.9053, "matched_fragments": 219, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017968845.1", "gtdb_species": "s__Microbacterium sp017968845", "ani": 77.8602, "matched_fragments": 162, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_005347485.1", "gtdb_species": "s__Microbacterium sp005347485", "ani": 77.8596, "matched_fragments": 255, "total_fragments": 972, "gtdb_taxonomy": 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"d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011046485.1", "gtdb_species": "s__Microbacterium sp011046485", "ani": 77.7306, "matched_fragments": 250, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001476285.1", "gtdb_species": "s__Microbacterium testaceum_B", "ani": 77.6716, "matched_fragments": 235, "total_fragments": 972, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Actinomycetales;f__Microbacteriaceae;g__Microbacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.43", "min_intra_species_ani": "98.38", "mean_intra_species_af": "0.88", "min_intra_species_af": "0.88", "num_clustered_genomes": 4, "status": "-" } ] }