# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_48	LOCUS_00460	sequence03:45019..45459(-)	frameshift		45456,45606	WP_003702887.1	site-specific integrase	99.3	46.9	57.2
MGA_49	LOCUS_00470	sequence03:45434..45601(-)	frameshift		45453,45606	WP_011476561.1	site-specific integrase	96.4	17.2	69.8
MGA_50	LOCUS_00480	sequence03:45598..45951(-)	frameshift		45456,45606	WP_003702887.1	site-specific integrase	94.9	35.9	64.0
MGA_51	LOCUS_00490	sequence03:46030..47202(-)	partial			WP_013390019.1	restriction endonuclease subunit S	47.7	45.5	49.5
MGA_54	LOCUS_00520	sequence03:48281..49243(+)	partial			WP_101621619.1	restriction endonuclease subunit S	85.6	68.9	46.9
MGA_78	LOCUS_00760	sequence03:76194..77201(-)	partial			WP_011101661.1	DNA internalization-related competence protein ComEC/Rec2	96.4	42.9	45.3
MGA_81	LOCUS_00790	sequence03:79013..79657(-)	partial			WP_011101662.1	helix-hairpin-helix domain-containing protein	83.2	74.7	40.6
MGA_136	LOCUS_01340	sequence03:133925..134920(-)	partial			WP_011101689.1	competence protein CoiA family protein	67.1	65.7	34.6
MGA_142	LOCUS_01380	sequence05:814..1677(-)	partial			WP_002352221.1	cell surface antigen I/II	76.0	12.6	30.7
MGA_152	LOCUS_01480	sequence07:6166..6519(-)	partial			WP_011476605.1	DUF5592 family protein	69.2	76.9	50.6
MGA_162	LOCUS_01580	sequence07:21602..22771(-)	partial			WP_056968221.1	toprim domain-containing protein	90.0	56.2	51.0
MGA_164	LOCUS_01600	sequence07:23963..>28379(-)	partial			WP_002352221.1	cell surface antigen I/II	37.6	35.0	37.0
MGA_175	LOCUS_01670	sequence11:7341..7700(+)	frameshift		7655	WP_011101818.1	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	83.2	23.4	90.0
MGA_176	LOCUS_01680	sequence11:7642..8631(+)	frameshift		7655	WP_011101818.1	O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase	94.5	72.7	80.7
MGA_181	LOCUS_01730	sequence11:13021..13188(-)	partial			WP_011254497.1	5-(carboxyamino)imidazole ribonucleotide synthase	85.5	12.5	57.4
MGA_207	LOCUS_01990	sequence11:40835..41401(-)	partial			WP_011101897.1	PAS domain-containing protein	98.4	42.9	47.0
MGA_212	LOCUS_02040	sequence11:46209..46610(+)	partial			WP_071742188.1	hypothetical protein	69.9	84.0	31.2
MGA_224	LOCUS_02160	sequence11:57688..57969(-)	internal_stop_codon	57976..57978(-),58069..58071(-)		WP_003548076.1	GyrI-like domain-containing protein	98.9	44.2	67.4
MGA_225	LOCUS_02170	sequence11:58069..58242(-)	internal_stop_codon	58291..58293(-),57976..57978(-),58069..58071(-)		WP_003548076.1	GyrI-like domain-containing protein	100.0	27.4	73.7
MGA_239	LOCUS_02310	sequence11:79262..79669(+)	internal_stop_codon	79256..79258(+)		WP_010906361.1	GNAT family N-acetyltransferase	87.4	67.5	36.4
MGA_248	LOCUS_02400	sequence11:87539..88084(-)	partial			WP_013229998.1	NAD(P)H-dependent oxidoreductase	80.7	44.0	40.1
MGA_274	LOCUS_02660	sequence11:116156..116809(+)	partial			WP_003641627.1	membrane protein insertase YidC	85.7	67.1	60.8
MGA_303	LOCUS_02950	sequence11:145680..146282(+)	internal_stop_codon	146280..146282(+)		WP_003546685.1	DUF3737 family protein	100.0	67.6	64.0
MGA_304	LOCUS_02960	sequence11:146328..146525(+)	internal_stop_codon	146280..146282(+)		WP_011101955.1	DUF3737 family protein	92.3	20.8	50.0
MGA_307	LOCUS_02990	sequence11:148672..149865(+)	partial			WP_116440634.1	YhgE/Pip domain-containing protein	73.0	40.6	24.7
MGA_320	LOCUS_03120	sequence11:166087..166917(+)	partial			WP_010902971.1	N-acyl homoserine lactonase family protein	82.2	72.8	26.9
MGA_323	LOCUS_03150	sequence11:169158..169856(+)	partial			WP_011084101.1	RibD family protein	62.9	62.3	30.5
MGA_324	LOCUS_03160	sequence11:169936..170988(-)	partial			WP_003549814.1	LCP family protein	86.6	71.9	41.1
MGA_333	LOCUS_03250	sequence11:176999..177247(+)	internal_stop_codon	177245..177247(+)		WP_003709717.1	ketopantoate reductase family protein	100.0	25.6	73.2
MGA_334	LOCUS_03260	sequence11:177257..177946(+)	internal_stop_codon	177245..177247(+)		WP_003709717.1	ketopantoate reductase family protein	100.0	71.9	75.7
MGA_356	LOCUS_03480	sequence11:204357..204998(-)	partial			WP_164924808.1	NAD(P)H-hydrate dehydratase	94.8	39.3	40.0
MGA_358	LOCUS_03500	sequence11:205738..206001(+)	partial			WP_003642252.1	helix-turn-helix transcriptional regulator	85.1	33.6	56.0
MGA_380	LOCUS_03710	sequence13:8928..9650(+)	partial			WP_003643232.1	MucBP domain-containing protein	94.6	66.0	26.0
MGA_388	LOCUS_03790	sequence13:16186..18282(-)	partial			WP_003546206.1	SEC10/PgrA surface exclusion domain-containing protein	17.6	34.1	27.5
MGA_391	LOCUS_03820	sequence13:23282..23713(-)	frameshift		23335	WP_135794525.1	serine hydrolase	77.6	41.3	36.7
MGA_393	LOCUS_03840	sequence13:24126..26588(-)	partial			WP_011475532.1	L,D-transpeptidase	18.0	69.4	54.7
MGA_394	LOCUS_03850	sequence13:26714..29488(-)	partial			WP_011101323.1	MucBP domain-containing protein	20.5	18.4	27.6
MGA_395	LOCUS_03860	sequence13:29653..31116(-)	partial			WP_003576133.1	LCP family protein	57.9	80.7	43.4
MGA_396	LOCUS_03870	sequence13:31221..31805(-)	partial			WP_010946699.1	decaprenyl-phosphate phosphoribosyltransferase	99.0	66.3	29.8
MGA_398	LOCUS_03890	sequence13:32604..33128(-)	frameshift,internal_stop_codon	32603..32605(-),33279..33281(-)	33136,33269	WP_011476454.1	hypothetical protein	81.6	25.1	30.7
MGA_401	LOCUS_03920	sequence13:33793..35112(-)	partial			WP_010774225.1	DUF6056 family protein	98.6	72.3	26.0
MGA_408	LOCUS_03990	sequence13:42036..44462(-)	partial			WP_011674023.1	GW dipeptide domain-containing protein	34.3	30.8	33.4
MGA_440	LOCUS_04310	sequence15:16747..17277(+)	frameshift		17253	WP_141741171.1	IS3 family transposase	99.4	37.0	34.1
MGA_460	LOCUS_04510	sequence16:18105..18992(-)	partial			WP_000705579.1	mandelate racemase/muconate lactonizing enzyme family protein	95.6	72.8	40.3
MGA_496	LOCUS_04850	sequence18:8256..9512(+)	partial			WP_011068213.1	chloride channel protein	87.8	72.7	34.4
MGA_564	LOCUS_05530	sequence18:86198..86374(-)	partial			WP_011475673.1	argininosuccinate synthase	84.5	12.2	81.6
MGA_657	LOCUS_06450	sequence20:2807..3337(+)	frameshift		3313	WP_141741171.1	IS3 family transposase	99.4	37.0	34.1
MGA_738	LOCUS_07230	sequence21:82980..83510(-)	frameshift		83003	WP_141741171.1	IS3 family transposase	99.4	37.0	34.1
MGA_785	LOCUS_07650	sequence24:4267..4491(+)	frameshift,internal_stop_codon	4150..4152(+)	4103	WP_010989461.1	LysR family transcriptional regulator	90.5	23.0	35.8
MGA_811	LOCUS_07910	sequence24:20299..21393(-)	partial			WP_028730510.1	FRG domain-containing protein	98.9	53.8	24.8
MGA_851	LOCUS_08310	sequence25:31614..31832(+)	partial			WP_000052064.1	F0F1 ATP synthase subunit C	73.6	73.6	58.5
MGA_927	LOCUS_09070	sequence25:115972..116484(-)	partial			WP_003733801.1	YslB family protein	74.7	77.4	38.8
MGA_932	LOCUS_09120	sequence25:119748..120179(+)	partial			WP_002357316.1	DUF948 domain-containing protein	71.3	76.2	37.6
MGA_946	LOCUS_09260	sequence26:7597..8085(-)	frameshift		8056,7589,7623	WP_003706145.1	endonuclease III	82.7	63.8	50.7
MGA_949	LOCUS_09290	sequence26:12374..12601(+)	frameshift,internal_stop_codon	12600..12602(+)	12296	WP_003733294.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	100.0	20.1	49.3
MGA_950	LOCUS_09300	sequence26:12641..13294(+)	internal_stop_codon	12599..12601(+)		WP_003733294.1	aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme	100.0	57.5	54.4
MGA_956	LOCUS_09360	sequence26:20697..21473(+)	partial			WP_000943339.1	VOC family protein	76.7	73.2	28.1
MGA_964	LOCUS_09440	sequence27:2904..3206(+)	partial			WP_011476349.1	ABC transporter permease	85.0	20.9	58.0
MGA_976	LOCUS_09530	sequence28:3606..6149(-)	partial			WP_011476405.1	C39 family peptidase	23.0	24.7	60.1
MGA_982	LOCUS_09590	sequence28:13665..14618(+)	partial			WP_011101287.1	glycosyltransferase family 2 protein	69.7	72.4	45.3
MGA_987	LOCUS_09600	sequence30:424..1425(+)	partial			WP_020902488.1	hypothetical protein	99.1	64.8	48.0
MGA_992	LOCUS_09650	sequence30:4696..5532(+)	partial			WP_011948617.1	Fic family protein	70.5	80.3	35.2
MGA_1009	LOCUS_09820	sequence30:13143..14534(+)	partial			WP_000190248.1	DnaD domain protein	20.1	37.5	35.5
MGA_1040	LOCUS_10130	sequence30:31370..33742(+)	partial			WP_011476612.1	ArdC-like ssDNA-binding domain-containing protein	54.7	34.3	32.2
MGA_1043	LOCUS_10160	sequence30:34560..34760(+)	partial			WP_003709392.1	DNA/RNA non-specific endonuclease	90.9	21.7	83.3
MGA_1051	LOCUS_10240	sequence30:38648..42196(+)	partial			WP_011254514.1	DUF1542 domain-containing protein	75.8	33.6	22.8
MGA_1056	LOCUS_10290	sequence31:856..1386(-)	frameshift		879	WP_141741171.1	IS3 family transposase	99.4	37.0	34.1
MGA_1062	LOCUS_10350	sequence32:856..1386(-)	frameshift		879	WP_141741171.1	IS3 family transposase	99.4	37.0	34.1
MGA_1074	LOCUS_10470	sequence32:15352..15864(+)	partial			WP_003643951.1	ComF family protein	97.6	73.2	48.2
MGA_1078	LOCUS_10510	sequence32:20364..20690(+)	partial			WP_011037304.1	PspC domain-containing protein	51.9	84.8	39.3
MGA_1086	LOCUS_10590	sequence32:28029..29822(-)	partial			WP_002326842.1	LTA synthase family protein	96.8	63.6	40.9
MGA_1113	LOCUS_10860	sequence33:9525..9956(-)	partial			WP_003548779.1	DUF438 domain-containing protein	81.8	29.3	29.4
MGA_1117	LOCUS_10900	sequence33:13338..14186(+)	partial			WP_003641072.1	CdaR family protein	81.2	70.8	39.6
MGA_1129	LOCUS_11020	sequence33:27236..28228(-)	partial			WP_002262113.1	GHKL domain-containing protein	73.9	55.8	32.8
MGA_1153	LOCUS_11260	sequence35:7463..7789(-)	partial			WP_115270946.1	IS110 family transposase	80.6	21.8	60.9
MGA_1168	LOCUS_11410	sequence35:24605..24997(+)	partial			WP_011475988.1	EbsA family protein	70.8	74.2	30.4
MGA_1173	LOCUS_11460	sequence35:30722..32914(+)	partial			WP_011254524.1	Rib/alpha-like domain-containing protein	16.6	6.8	30.8
MGA_1187	LOCUS_11600	sequence35:50130..51080(+)	partial			WP_011987094.1	YdcF family protein	64.2	63.8	29.5
MGA_1214	LOCUS_11870	sequence36:32590..33777(-)	partial			WP_011100956.1	CPBP family intramembrane metalloprotease	51.9	82.4	30.1
MGA_1235	LOCUS_12080	sequence36:58724..60262(-)	partial			WP_011123196.1	helix-turn-helix domain-containing protein	25.6	47.0	28.0
MGA_1243	LOCUS_12160	sequence36:69703..72051(-)	partial			WP_011836785.1	CshA/CshB family fibrillar adhesin-related protein	37.6	15.0	25.3
MGA_1257	LOCUS_12300	sequence36:84633..85310(-)	partial			WP_001259486.1	matrixin family metalloprotease	68.4	61.9	33.8
MGA_1273	LOCUS_12460	sequence36:101796..102032(+)	partial			WP_011475487.1	helix-turn-helix domain-containing protein	88.5	49.6	40.6
MGA_1288	LOCUS_12610	sequence36:118233..120815(-)	partial			WP_011674061.1	YhgE/Pip domain-containing protein	80.9	71.5	35.7
MGA_1289	LOCUS_12620	sequence36:120864..121403(-)	partial			WP_011101963.1	TetR/AcrR family transcriptional regulator	86.6	71.6	29.0
MGA_1337	LOCUS_13100	sequence36:174698..175201(+)	partial			WP_011100921.1	energy-coupling factor transporter transmembrane component T	95.8	73.1	50.0
MGA_1351	LOCUS_13240	sequence36:187864..188046(-)	frameshift,internal_stop_codon	188229..188231(-)	188129	WP_002262242.1	zinc-binding alcohol dehydrogenase family protein	98.3	18.4	42.4
MGA_1352	LOCUS_13250	sequence36:188229..188819(-)	frameshift,internal_stop_codon	188229..188231(-)	188132	WP_002904591.1	zinc-binding alcohol dehydrogenase family protein	100.0	60.9	60.7
MGA_1365	LOCUS_13370	sequence37:2739..4262(+)	partial			WP_032910596.1	bifunctional glutamate--cysteine ligase GshA/glutathione synthetase GshB	90.3	59.5	31.3
MGA_1386	LOCUS_13580	sequence37:21967..22800(+)	partial			WP_083750438.1	glycosyltransferase	66.4	81.4	29.3
MGA_1390	LOCUS_13610	sequence38:1168..1347(+)	partial			WP_011254318.1	YSIRK-type signal peptide-containing protein	88.1	2.3	62.3
MGA_1391	LOCUS_13620	sequence38:1310..3748(+)	partial			WP_207215633.1	MucBP domain-containing protein	67.0	47.1	25.8
MGA_1395	LOCUS_13660	sequence38:7954..9795(+)	partial			WP_001056195.1	MSCRAMM family adhesin clumping factor ClfA	84.7	55.4	16.5
MGA_1405	LOCUS_13760	sequence38:21303..21497(+)	internal_stop_codon	21495..21497(+)		WP_003548013.1	peptide-methionine (R)-S-oxide reductase MsrB	100.0	44.1	73.4
MGA_1406	LOCUS_13770	sequence38:21561..21746(+)	internal_stop_codon	21495..21497(+)		WP_003548013.1	peptide-methionine (R)-S-oxide reductase MsrB	96.7	40.7	76.3
MGA_1418	LOCUS_13890	sequence38:32579..>34229(-)	partial			WP_011254524.1	Rib/alpha-like domain-containing protein	27.3	8.3	37.3
MGA_1425	LOCUS_13950	sequence39:6344..6541(+)	frameshift,internal_stop_codon	6321..6323(+),6582..6584(+)	6280,6521,6244,6527	WP_004894681.1	Fe-S cluster assembly ATPase SufC	93.8	25.0	75.8
MGA_1443	LOCUS_14130	sequence39:24881..25951(+)	partial			WP_010905256.1	LysM peptidoglycan-binding domain-containing protein	48.3	40.8	44.1
MGA_1462	LOCUS_14320	sequence39:36538..37233(+)	partial			WP_125080931.1	AAA family ATPase	78.8	31.6	31.8
MGA_1481	LOCUS_14510	sequence39:45729..47006(+)	partial			WP_010922657.1	type I restriction-modification system subunit M	63.3	53.4	47.9
MGA_1507	LOCUS_14770	sequence39:67679..68188(+)	partial			WP_010966554.1	leucine-rich repeat domain-containing protein	57.4	11.5	35.7
MGA_1514	LOCUS_14840	sequence39:71081..72211(+)	partial			WP_002415467.1	GH25 family lysozyme	67.6	64.2	34.3
MGA_1561	LOCUS_15310	sequence39:112603..113274(+)	frameshift,internal_stop_codon	113468..113470(+)	113500	WP_011476411.1	glutamate/gamma-aminobutyrate family transporter YjeM	86.5	39.5	54.1
MGA_1571	LOCUS_15410	sequence39:122591..122935(+)	partial			WP_000230083.1	endolytic transglycosylase MltG	96.5	30.3	27.3
MGA_1602	LOCUS_15720	sequence39:148439..148732(+)	partial			WP_003547938.1	exodeoxyribonuclease VII small subunit	66.0	80.0	57.8
MGA_1640	LOCUS_16100	sequence39:186841..187419(+)	partial			WP_011475497.1	matrixin family metalloprotease	84.4	73.7	55.6