{ "type": "genome", "identifier": "GCF_014191255.1", "organism": "Amycolatopsis bartoniae", "title": "Amycolatopsis bartoniae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014191255.1", "bioproject": "PRJNA224116", "biosample": "SAMN12024902", "wgs_master": "JACHWH000000000.1", "refseq_category": "reference genome", "taxid": "941986", "species_taxid": "941986", "organism_name": "Amycolatopsis bartoniae", "infraspecific_name": "strain=DSM 45807", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/14", "asm_name": "ASM1419125v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_014191255.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/191/255/GCF_014191255.1_ASM1419125v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7757008", "genome_size_ungapped": "7757008", "gc_percent": "71.000000", "replicon_count": "0", "scaffold_count": "23", "contig_count": "23", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014191255.1-RS_2024_09_26", "annotation_date": "2024-09-26", "total_gene_count": "7342", "protein_coding_gene_count": "7178", "non_coding_gene_count": "61", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-14", "dateModified": "2020-08-14", "datePublished": "2020-08-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Amycolatopsis bartoniae" ], "sample_taxid": [ "941986" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"below_threshold" }, { "organism_name": "Amycolatopsis acidiphila", "strain": "strain=KCTC 39523", "accession": "GCA_021391495.1", "taxid": 715473, "species_taxid": 715473, "relation_to_type": "type", "validated": true, "ani": 85.3491, "matched_fragments": 1658, "total_fragments": 2574, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis thermalba", "strain": "strain=NRRL B-24845", "accession": "GCA_003385215.1", "taxid": 944492, "species_taxid": 944492, "relation_to_type": "type", "validated": true, "ani": 82.6919, "matched_fragments": 1318, "total_fragments": 2574, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis arida", "strain": "strain=CGMCC 4.5579", "accession": "GCA_900115565.1", "taxid": 587909, "species_taxid": 587909, "relation_to_type": "type", "validated": true, "ani": 80.1561, "matched_fragments": 1009, "total_fragments": 2574, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis arida", "strain": "strain=DSM 45648", "accession": "GCA_004365925.1", "taxid": 587909, "species_taxid": 587909, "relation_to_type": "type", "validated": true, "ani": 80.1455, "matched_fragments": 1003, "total_fragments": 2574, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prauserella cavernicola", "strain": "strain=ASG 168", "accession": "GCA_016595675.1", "taxid": 2800127, "species_taxid": 2800127, "relation_to_type": "type", "validated": true, "ani": 79.9066, "matched_fragments": 1053, "total_fragments": 2574, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Prauserella aidingensis", "strain": "strain=DSM 45266", "accession": "GCA_024171865.1", "taxid": 387890, "species_taxid": 387890, "relation_to_type": "type", "validated": true, "ani": 79.076, "matched_fragments": 846, "total_fragments": 2574, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea tibetensis", "strain": "strain=FXJ1.1311", 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"coccobacillus_cell_shape": 0.0, "vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Amycolatopsis", "bartoniae" ], "quality": 5, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }