{ "type": "genome", "identifier": "GCF_014192015.1", "organism": "Paenibacillus rhizosphaerae", "title": "Paenibacillus rhizosphaerae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014192015.1", "bioproject": "PRJNA224116", "biosample": "SAMN12025162", "wgs_master": "JACHXJ000000000.1", "refseq_category": "reference genome", "taxid": "297318", "species_taxid": "297318", "organism_name": "Paenibacillus rhizosphaerae", "infraspecific_name": "strain=CECT 5831", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/14", "asm_name": "ASM1419201v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_014192015.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/192/015/GCF_014192015.1_ASM1419201v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7550850", "genome_size_ungapped": "7550467", "gc_percent": "53.000000", "replicon_count": "0", "scaffold_count": "18", "contig_count": "18", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014192015.1-RS_2024_09_29", "annotation_date": "2024-09-29", "total_gene_count": "6968", "protein_coding_gene_count": "6792", "non_coding_gene_count": "86", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-14", "dateModified": "2020-08-14", "datePublished": "2020-08-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Paenibacillus rhizosphaerae" ], "sample_taxid": [ "297318" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": 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76.6716, "matched_fragments": 250, "total_fragments": 2509, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paenibacillus rhizovicinus", "strain": "strain=14171R-81", "accession": "GCA_010365285.1", "taxid": 2704463, "species_taxid": 2704463, "relation_to_type": "type", "validated": true, "ani": 76.604, "matched_fragments": 191, "total_fragments": 2509, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cohnella panacarvi", "strain": "strain=Gsoil 349", "accession": "GCA_000515335.1", "taxid": 400776, "species_taxid": 400776, "relation_to_type": "type", "validated": true, "ani": 76.1959, "matched_fragments": 118, "total_fragments": 2509, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 98.96, "contamination": 0.38, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014192015.1", "gtdb_species": "s__Paenibacillus rhizosphaerae", "ani": 100.0, "matched_fragments": 2507, "total_fragments": 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