{ "type": "genome", "identifier": "GCF_014192475.1", "organism": "Simiduia aestuariiviva", "title": "Simiduia aestuariiviva", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014192475.1", "bioproject": "PRJNA224116", "biosample": "SAMN12025083", "wgs_master": "JACHXZ000000000.1", "refseq_category": "reference genome", "taxid": "1510459", "species_taxid": "1510459", "organism_name": "Simiduia aestuariiviva", "infraspecific_name": "strain=CECT 8571", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/14", "asm_name": "ASM1419247v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_014192475.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/192/475/GCF_014192475.1_ASM1419247v1", 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"sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "1.064 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "3739502", "Number of Sequences": "10", "Longest Sequences (bp)": "1273130", "N50 (bp)": "890717", "Gap Ratio (%)": "0.023158", "GCcontent (%)": "53.2", "Number of CDSs": "3388", "Average Protein Length": "325.3", "Coding Ratio (%)": "88.4", "Number of rRNAs": "3", "Number of tRNAs": "41", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Simiduia aestuariiviva", "strain": "strain=CECT 8571", "accession": "GCA_014192475.1", "taxid": 1510459, "species_taxid": 1510459, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1240, 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"Pseudoteredinibacter isoporae", "strain": "strain=LMG 25246", "accession": "GCA_011602085.1", "taxid": 570281, "species_taxid": 570281, "relation_to_type": "type", "validated": true, "ani": 76.6748, "matched_fragments": 65, "total_fragments": 1241, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gilvimarinus chinensis", "strain": "strain=DSM 19667", "accession": "GCA_000377745.1", "taxid": 396005, "species_taxid": 396005, "relation_to_type": "type", "validated": true, "ani": 76.6713, "matched_fragments": 64, "total_fragments": 1241, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Microbulbifer elongatus", "strain": "strain=DSM 6810", "accession": "GCA_021165935.1", "taxid": 86173, "species_taxid": 86173, "relation_to_type": "type", "validated": true, "ani": 76.6425, "matched_fragments": 63, "total_fragments": 1241, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cellvibrio zantedeschiae", "strain": "strain=KCTC 32239", "accession": "GCA_014652535.1", "taxid": 1237077, "species_taxid": 1237077, "relation_to_type": "type", "validated": true, "ani": 76.636, "matched_fragments": 52, "total_fragments": 1241, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aestuariicella albida", "strain": "strain=HHU G3-2", "accession": "GCA_018863235.1", "taxid": 2842452, "species_taxid": 2842452, "relation_to_type": "type", "validated": true, "ani": 76.4349, "matched_fragments": 73, "total_fragments": 1241, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aestuariicella hydrocarbonica", "strain": "strain=JCM 30134", "accession": "GCA_011602365.1", "taxid": 1470433, "species_taxid": 1470433, "relation_to_type": "type", "validated": true, "ani": 76.2918, "matched_fragments": 89, "total_fragments": 1241, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gilvimarinus polysaccharolyticus", "strain": "strain=YN3", "accession": "GCA_001187555.1", 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