{ "tc_result": [ { "organism_name": "Niveibacterium umoris", "strain": "strain=DSM 106739", "accession": "GCA_014197015.1", "taxid": 1193620, "species_taxid": 1193620, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1591, "total_fragments": 1593, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Niveibacterium umoris", "strain": "strain=KACC 17062", "accession": "GCA_017311475.1", "taxid": 1193620, "species_taxid": 1193620, "relation_to_type": "type", "validated": true, "ani": 99.9853, "matched_fragments": 1568, "total_fragments": 1593, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Niveibacterium microcysteis", "strain": "strain=HC41", "accession": "GCA_017161445.1", "taxid": 2811415, "species_taxid": 2811415, "relation_to_type": "type", "validated": true, "ani": 84.8318, "matched_fragments": 1049, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera butanivorans", "strain": "strain=NBRC 103042", "accession": "GCA_001591165.1", "taxid": 86174, "species_taxid": 86174, "relation_to_type": "type", "validated": true, "ani": 78.7051, "matched_fragments": 348, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera propionica", "strain": "strain=KNDSS-Mac4", "accession": "GCA_002245655.1", "taxid": 2019431, "species_taxid": 2019431, "relation_to_type": "type", "validated": true, "ani": 78.57, "matched_fragments": 341, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera phenolivorans", "strain": "strain=ZV1C", "accession": "GCA_001696715.1", "taxid": 1792543, "species_taxid": 1792543, "relation_to_type": "type", "validated": true, "ani": 78.5316, "matched_fragments": 310, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zoogloea ramigera", "strain": "strain=NBRC 15342", "accession": "GCA_006539865.1", "taxid": 350, "species_taxid": 350, "relation_to_type": "type", "validated": true, "ani": 78.2348, "matched_fragments": 344, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum buckelii", "strain": "strain=U120", "accession": "GCA_012910785.2", "taxid": 200254, "species_taxid": 200254, "relation_to_type": "type", "validated": true, "ani": 78.1766, "matched_fragments": 280, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera linaloolentis", "strain": "strain=47Lol = DSM 12138", "accession": "GCA_000310205.1", "taxid": 76112, "species_taxid": 76112, "relation_to_type": "type", "validated": true, "ani": 78.0894, "matched_fragments": 345, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thauera linaloolentis", "strain": "strain=DSM 12138", "accession": "GCA_000621305.1", "taxid": 76112, "species_taxid": 76112, "relation_to_type": "type", "validated": true, "ani": 78.0823, "matched_fragments": 350, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aromatoleum toluolicum", "strain": "strain=T", "accession": "GCA_012911005.2", "taxid": 90060, "species_taxid": 90060, "relation_to_type": "type", "validated": true, "ani": 78.0288, "matched_fragments": 381, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Zoogloea dura", "strain": "strain=G-4-1-14", "accession": "GCA_012927165.1", "taxid": 2728840, "species_taxid": 2728840, "relation_to_type": "type", "validated": true, "ani": 77.9522, "matched_fragments": 361, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azoarcus indigens", "strain": "strain=VB32", "accession": "GCA_012910835.1", "taxid": 29545, "species_taxid": 29545, "relation_to_type": "type", "validated": true, "ani": 77.774, "matched_fragments": 353, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitrogeniibacter mangrovi", "strain": "strain=M9-3-2", "accession": "GCA_010983895.1", "taxid": 2016596, "species_taxid": 2016596, "relation_to_type": "type", "validated": true, "ani": 77.6567, "matched_fragments": 320, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Azoarcus communis", "strain": "strain=SWub3", "accession": "GCA_012910815.1", "taxid": 41977, "species_taxid": 41977, "relation_to_type": "type", "validated": true, "ani": 77.6148, "matched_fragments": 233, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Cupriavidus numazuensis", "strain": "strain=LMG 26411", "accession": "GCA_905397435.1", "taxid": 221992, "species_taxid": 221992, "relation_to_type": "type", "validated": true, "ani": 77.0252, "matched_fragments": 238, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Burkholderia perseverans", "strain": "strain=INN12", "accession": "GCA_022870505.1", "taxid": 2615214, "species_taxid": 2615214, "relation_to_type": "type", "validated": true, "ani": 76.7828, "matched_fragments": 320, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas composti", "strain": "strain=TR7-09", "accession": "GCA_000747175.1", "taxid": 370776, "species_taxid": 370776, "relation_to_type": "type", "validated": true, "ani": 76.3849, "matched_fragments": 134, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Arenimonas composti", "strain": "strain=DSM 18010", "accession": "GCA_000426365.1", "taxid": 370776, "species_taxid": 370776, "relation_to_type": "type", "validated": true, "ani": 76.3106, "matched_fragments": 141, "total_fragments": 1593, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 4.17, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014197015.1", "gtdb_species": "s__Niveibacterium umoris", "ani": 100.0, "matched_fragments": 1591, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Niveibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "conclusive" }, { "accession": "GCF_017161445.1", "gtdb_species": "s__Niveibacterium microcysteis", "ani": 84.8519, "matched_fragments": 1050, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Niveibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.91", "min_intra_species_ani": "97.91", "mean_intra_species_af": "0.91", "min_intra_species_af": "0.91", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001591165.1", "gtdb_species": "s__Thauera butanivorans", "ani": 78.7284, "matched_fragments": 346, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001051995.2", "gtdb_species": "s__Thauera humireducens", "ani": 78.6072, "matched_fragments": 339, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "97.91", "min_intra_species_ani": "97.91", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.83", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_002245655.1", "gtdb_species": "s__Thauera propionica", "ani": 78.5925, "matched_fragments": 339, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.06", "min_intra_species_ani": "98.06", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001696715.1", "gtdb_species": "s__Thauera phenolivorans", "ani": 78.5549, "matched_fragments": 308, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.27", "min_intra_species_ani": "99.27", "mean_intra_species_af": "0.98", "min_intra_species_af": "0.98", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_001682385.1", "gtdb_species": "s__Azoarcus olearius", "ani": 78.2588, "matched_fragments": 386, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azoarcus", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.77", "min_intra_species_ani": "98.77", "mean_intra_species_af": "0.96", "min_intra_species_af": "0.96", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_006539865.1", "gtdb_species": "s__Zoogloea ramigera", "ani": 78.2216, "matched_fragments": 345, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Zoogloea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.03", "min_intra_species_ani": "99.03", "mean_intra_species_af": "0.93", "min_intra_species_af": "0.93", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_017302295.1", "gtdb_species": "s__Thauera sp017302295", "ani": 78.1347, "matched_fragments": 326, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012910785.1", "gtdb_species": "s__Aromatoleum buckelii", "ani": 78.1309, "matched_fragments": 290, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Aromatoleum", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000310205.1", "gtdb_species": "s__Thauera linaloolentis", "ani": 78.1116, "matched_fragments": 343, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCA_018240585.1", "gtdb_species": "s__Thauera sp018240585", "ani": 78.0813, "matched_fragments": 302, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_009781175.1", "gtdb_species": "s__Niveibacterium sp009781175", "ani": 78.0686, "matched_fragments": 290, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Niveibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_014736495.1", "gtdb_species": "s__Dactylopiibacterium carminicum", "ani": 78.0429, "matched_fragments": 208, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Dactylopiibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.96", "min_intra_species_ani": "99.89", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.97", "num_clustered_genomes": 4, "status": "-" }, { "accession": "GCA_002422685.1", "gtdb_species": "s__Thauera sp002422685", "ani": 77.9814, "matched_fragments": 299, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Thauera", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_012927165.1", "gtdb_species": "s__Zoogloea sp012927165", "ani": 77.9604, "matched_fragments": 360, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Zoogloea", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_013911595.1", "gtdb_species": "s__Azoarcus_D sp013911595", "ani": 77.7407, "matched_fragments": 184, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azoarcus_D", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCA_016718265.1", "gtdb_species": "s__Uliginosibacterium sp016718265", "ani": 77.7379, "matched_fragments": 220, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Uliginosibacterium", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.20", "min_intra_species_ani": "98.02", "mean_intra_species_af": "0.86", "min_intra_species_af": "0.86", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_003226565.1", "gtdb_species": "s__Azoarcus_C communis", "ani": 77.6757, "matched_fragments": 230, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azoarcus_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.33", "min_intra_species_ani": "98.67", "mean_intra_species_af": "0.90", "min_intra_species_af": "0.80", "num_clustered_genomes": 3, "status": "-" }, { "accession": "GCF_018122735.1", "gtdb_species": "s__Azoarcus_C sp018122735", "ani": 77.5254, "matched_fragments": 276, "total_fragments": 1593, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Gammaproteobacteria;o__Burkholderiales;f__Rhodocyclaceae;g__Azoarcus_C", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }