{ "tc_result": [ { "organism_name": "Sphingomonas xinjiangensis", "strain": "strain=DSM 26736", "accession": "GCA_014199255.1", "taxid": 643568, "species_taxid": 643568, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 1457, "total_fragments": 1458, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=DSM 100060", "accession": "GCA_011762145.1", "taxid": 1344951, "species_taxid": 1344951, "relation_to_type": "type", "validated": true, "ani": 80.9843, "matched_fragments": 683, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas naasensis", "strain": "strain=KIS18-15", "accession": "GCA_004792695.1", "taxid": 1344951, "species_taxid": 1344951, "relation_to_type": "type", "validated": true, "ani": 80.9668, "matched_fragments": 688, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas 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"GCA_011927635.1", "taxid": 53317, "species_taxid": 53317, "relation_to_type": "type", "validated": true, "ani": 80.4487, "matched_fragments": 617, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas psychrotolerans", "strain": "strain=Cra20", "accession": "GCA_002796605.1", "taxid": 1327635, "species_taxid": 1327635, "relation_to_type": "type", "validated": true, "ani": 80.3496, "matched_fragments": 671, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas azotifigens", "strain": "strain=NBRC 15497", "accession": "GCA_002091475.1", "taxid": 330920, "species_taxid": 330920, "relation_to_type": "type", "validated": true, "ani": 80.3426, "matched_fragments": 623, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas pituitosa", "strain": "strain=NBRC 102491", "accession": "GCA_001598435.1", "taxid": 99597, "species_taxid": 99597, "relation_to_type": "type", "validated": true, "ani": 80.3078, "matched_fragments": 664, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas hengshuiensis", "strain": "strain=WHSC-8", "accession": "GCA_000935025.1", "taxid": 1609977, "species_taxid": 1609977, "relation_to_type": "type", "validated": true, "ani": 80.2791, "matched_fragments": 644, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas soli", "strain": "strain=NBRC 100801", "accession": "GCA_001591025.1", "taxid": 266127, "species_taxid": 266127, "relation_to_type": "type", "validated": true, "ani": 79.8379, "matched_fragments": 506, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas aracearum", "strain": "strain=WZY 27", "accession": "GCA_003345355.1", "taxid": 2283317, "species_taxid": 2283317, "relation_to_type": "type", "validated": true, "ani": 79.2549, "matched_fragments": 453, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas suaedae", "strain": "strain=XS-10", "accession": "GCA_007833215.1", "taxid": 2599297, "species_taxid": 2599297, "relation_to_type": "type", "validated": true, "ani": 79.0234, "matched_fragments": 466, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas baiyangensis", "strain": "strain=L-1-4 w-11", "accession": "GCA_005144715.1", "taxid": 2572576, "species_taxid": 2572576, "relation_to_type": "type", "validated": true, "ani": 78.7391, "matched_fragments": 435, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas corticis", "strain": "strain=36D10-4-7", "accession": "GCA_012035195.1", "taxid": 2722791, "species_taxid": 2722791, "relation_to_type": "type", "validated": true, "ani": 78.5905, "matched_fragments": 448, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Sphingomonas radiodurans", "strain": "strain=S9-5", "accession": "GCA_020866845.1", "taxid": 2890321, "species_taxid": 2890321, "relation_to_type": "type", "validated": true, "ani": 78.3802, "matched_fragments": 341, "total_fragments": 1458, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014199255.1", "gtdb_species": "s__Sphingomonas xinjiangensis", "ani": 100.0, "matched_fragments": 1457, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "conclusive" }, { "accession": "GCF_002002925.1", "gtdb_species": "s__Sphingomonas sp002002925", "ani": 80.9981, "matched_fragments": 677, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004792695.1", "gtdb_species": "s__Sphingomonas naasensis", "ani": 80.982, "matched_fragments": 686, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "100.00", "min_intra_species_ani": "100.00", "mean_intra_species_af": "1.00", "min_intra_species_af": "1.00", "num_clustered_genomes": 2, "status": 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"gtdb_species": "s__Sphingomonas kyeonggiensis", "ani": 80.5843, "matched_fragments": 660, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_004792685.1", "gtdb_species": "s__Sphingomonas gei", "ani": 80.5702, "matched_fragments": 660, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_011927635.1", "gtdb_species": "s__Sphingomonas 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80.3535, "matched_fragments": 671, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_002091475.1", "gtdb_species": "s__Sphingomonas azotifigens", "ani": 80.3519, "matched_fragments": 622, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001598435.1", "gtdb_species": "s__Sphingomonas pituitosa", "ani": 80.3106, 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"total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "99.99", "min_intra_species_ani": "99.99", "mean_intra_species_af": "0.99", "min_intra_species_af": "0.99", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_014489075.1", "gtdb_species": "s__Sphingomonas sp014489075", "ani": 80.1522, "matched_fragments": 644, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001591025.1", "gtdb_species": "s__Sphingomonas soli", "ani": 79.8377, "matched_fragments": 506, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_007833215.1", "gtdb_species": "s__Sphingomonas sp007833215", "ani": 79.0418, "matched_fragments": 463, "total_fragments": 1458, "gtdb_taxonomy": "d__Bacteria;p__Proteobacteria;c__Alphaproteobacteria;o__Sphingomonadales;f__Sphingomonadaceae;g__Sphingomonas", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }