{ "type": "genome", "identifier": "GCF_014199445.1", "organism": "Rubricella aquisinus", "title": "Rubricella aquisinus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014199445.1", "bioproject": "PRJNA224116", "biosample": "SAMN12025136", "wgs_master": "JACIJS000000000.1", "refseq_category": "reference genome", "taxid": "2028108", "species_taxid": "2028108", "organism_name": "Rubricella aquisinus", "infraspecific_name": "strain=DSM 103377", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/14", "asm_name": "ASM1419944v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_014199445.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/199/445/GCF_014199445.1_ASM1419944v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3243171", "genome_size_ungapped": "3242981", "gc_percent": "62.000000", "replicon_count": "0", "scaffold_count": "23", "contig_count": "23", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014199445.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "3238", "protein_coding_gene_count": "3174", "non_coding_gene_count": "48", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-14", "dateModified": "2020-08-14", "datePublished": "2020-08-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Rubricella aquisinus" ], "sample_taxid": [ "2028108" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"GCA_001870675.1", "taxid": 121821, "species_taxid": 121821, "relation_to_type": "type", "validated": true, "ani": 76.6845, "matched_fragments": 133, "total_fragments": 1069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Salibaculum griseiflavum", "strain": "strain=WDS4C29", "accession": "GCA_003129565.1", "taxid": 1914409, "species_taxid": 1914409, "relation_to_type": "type", "validated": true, "ani": 76.6577, "matched_fragments": 164, "total_fragments": 1069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Phaeovulum veldkampii", "strain": "strain=DSM 11550", "accession": "GCA_004363195.1", "taxid": 33049, "species_taxid": 33049, "relation_to_type": "type", "validated": true, "ani": 76.6416, "matched_fragments": 165, "total_fragments": 1069, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmobacter fulva", "strain": "strain=con5", "accession": "GCA_018798885.1", "taxid": 2840474, "species_taxid": 2840474, 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