{
    "type": "genome",
    "identifier": "GCF_014199525.1",
    "organism": "Conexibacter arvalis",
    "title": "Conexibacter arvalis",
    "description": "na",
    "data type": "Genome sequencing and assembly",
    "organization": "DOE Joint Genome Institute",
    "publication": [
        {}
    ],
    "properties": {
        "assembly_accession": "GCF_014199525.1",
        "bioproject": "PRJNA224116",
        "biosample": "SAMN05446537",
        "wgs_master": "JACHNU000000000.1",
        "refseq_category": "reference genome",
        "taxid": "912552",
        "species_taxid": "912552",
        "organism_name": "Conexibacter arvalis",
        "infraspecific_name": "strain=DSM 23288",
        "isolate": "na",
        "version_status": "latest",
        "assembly_level": "Scaffold",
        "release_type": "Major",
        "genome_rep": "Full",
        "seq_rel_date": "2020/08/14",
        "asm_name": "ASM1419952v1",
        "asm_submitter": "DOE Joint Genome Institute",
        "gbrs_paired_asm": "GCA_014199525.1",
        "paired_asm_comp": "identical",
        "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/199/525/GCF_014199525.1_ASM1419952v1",
        "excluded_from_refseq": "na",
        "relation_to_type_material": "assembly from type material",
        "asm_not_live_date": "na        ",
        "assembly_type": "haploid",
        "group": "bacteria",
        "genome_size": "5200601",
        "genome_size_ungapped": "5200402",
        "gc_percent": "73.500000",
        "replicon_count": "0",
        "scaffold_count": "18",
        "contig_count": "18",
        "annotation_provider": "NCBI RefSeq",
        "annotation_name": "GCF_014199525.1-RS_2024_05_05",
        "annotation_date": "2024-05-05",
        "total_gene_count": "4898",
        "protein_coding_gene_count": "4819",
        "non_coding_gene_count": "55",
        "pubmed_id": "na"
    },
    "dbXrefs": [],
    "distribution": null,
    "Download": null,
    "status": "public",
    "visibility": null,
    "dateCreated": "2020-08-14",
    "dateModified": "2020-08-14",
    "datePublished": "2020-08-14",
    "_annotation": {
        "sample_count": 1,
        "sample_organism": [
            "Conexibacter arvalis"
        ],
        "sample_taxid": [
            "912552"
        ],
        "sample_host_organism": [
            "not applicable"
        ],
        "sample_host_organism_id": [],
        "sample_host_disease": [],
        "sample_host_disease_id": [],
        "sample_host_location": [
            "missing"
        ],
        "sample_host_location_id": [],
        "data_size": "1.339 MB",
        "sample_ph_range": {
            "min": null,
            "max": null
        },
        "sample_temperature_range": {
            "min": null,
            "max": null
        },
        "completeness": 100.0,
        "contamination": 4.17,
        "strain_heterogeneity": 0.0,
        "genome_count": 1
    },
    "data_type": "G",
    "data_source": "RefSeq",
    "_dfast": {
        "Total Sequence Length (bp)": "5200601",
        "Number of Sequences": "18",
        "Longest Sequences (bp)": "1837847",
        "N50 (bp)": "807559",
        "Gap Ratio (%)": "0.003826",
        "GCcontent (%)": "73.7",
        "Number of CDSs": "4885",
        "Average Protein Length": "326.7",
        "Coding Ratio (%)": "92.1",
        "Number of rRNAs": "3",
        "Number of tRNAs": "74",
        "Number of CRISPRs": "1"
    },
    "has_analysis": true,
    "_dfastqc": {
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                "organism_name": "Conexibacter arvalis",
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                "relation_to_type": "type",
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                "status": "conclusive"
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            {
                "organism_name": "Conexibacter woesei",
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                "species_taxid": 191495,
                "relation_to_type": "type",
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                "ani": 84.5539,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Capillimicrobium parvum",
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                "accession": "GCA_021172045.1",
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                "species_taxid": 2884022,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
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                "organism_name": "Paraconexibacter algicola",
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                "species_taxid": 2133960,
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                "validated": true,
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                "matched_fragments": 725,
                "total_fragments": 1725,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Patulibacter medicamentivorans",
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                "accession": "GCA_000240225.2",
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                "species_taxid": 1097667,
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                "validated": true,
                "ani": 77.6818,
                "matched_fragments": 692,
                "total_fragments": 1725,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Baekduia soli",
                "strain": "strain=BR7-21",
                "accession": "GCA_007970665.1",
                "taxid": 496014,
                "species_taxid": 496014,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.6476,
                "matched_fragments": 726,
                "total_fragments": 1725,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Solirubrobacter pauli",
                "strain": "strain=DSM 14954",
                "accession": "GCA_003633755.1",
                "taxid": 166793,
                "species_taxid": 166793,
                "relation_to_type": "type",
                "validated": true,
                "ani": 77.3219,
                "matched_fragments": 822,
                "total_fragments": 1725,
                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Patulibacter americanus",
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                "accession": "GCA_000420025.1",
                "taxid": 588672,
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                "relation_to_type": "type",
                "validated": true,
                "ani": 76.9501,
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                "ani_threshold": 95,
                "status": "below_threshold"
            },
            {
                "organism_name": "Agromyces fucosus",
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                "accession": "GCA_004134865.1",
                "taxid": 41985,
                "species_taxid": 41985,
                "relation_to_type": "type",
                "validated": true,
                "ani": 75.1498,
                "matched_fragments": 349,
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                "ani_threshold": 95,
                "status": "below_threshold"
            }
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                "accession": "GCF_014199525.1",
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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                "mean_intra_species_ani": "N/A",
                "min_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            {
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                "mean_intra_species_ani": "N/A",
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                "num_clustered_genomes": 1,
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            },
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                "accession": "GCF_003044185.1",
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        ]
    },
    "_bac2feature": {
        "phenotypes": null,
        "cell_diameter": -0.046,
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    "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f"
}