{ "type": "genome", "identifier": "GCF_014201655.1", "organism": "Thermosipho japonicus", "title": "Thermosipho japonicus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014201655.1", "bioproject": "PRJNA224116", "biosample": "SAMN14908555", "wgs_master": "JACHEX000000000.1", "refseq_category": "reference genome", "taxid": "90323", "species_taxid": "90323", "organism_name": "Thermosipho japonicus", "infraspecific_name": "strain=DSM 13481", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/14", "asm_name": "ASM1420165v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_014201655.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/201/655/GCF_014201655.1_ASM1420165v1", "excluded_from_refseq": 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95, "status": "inconclusive" }, { "organism_name": "Thermosipho globiformans", "strain": "strain=JCM 15059", "accession": "GCA_003990895.1", "taxid": 380685, "species_taxid": 380685, "relation_to_type": "type", "validated": true, "ani": 95.3676, "matched_fragments": 576, "total_fragments": 634, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Thermosipho africanus", "strain": "strain=Ob7", "accession": "GCA_003351105.1", "taxid": 2421, "species_taxid": 2421, "relation_to_type": "type", "validated": true, "ani": 93.981, "matched_fragments": 568, "total_fragments": 634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermosipho melanesiensis", "strain": "strain=BI429", "accession": "GCA_000016905.1", "taxid": 46541, "species_taxid": 46541, "relation_to_type": "type", "validated": true, "ani": 77.9432, "matched_fragments": 230, "total_fragments": 634, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Thermosipho affectus", 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"mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_017358165.1", "gtdb_species": "s__JL129W03 sp017358165", "ani": 77.0985, "matched_fragments": 84, "total_fragments": 634, "gtdb_taxonomy": "d__Bacteria;p__Thermotogota;c__Thermotogae;o__Thermotogales;f__Fervidobacteriaceae;g__JL129W03", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }, "_bac2feature": { "phenotypes": null, "cell_diameter": -0.398, "cell_length": 0.255, "doubling_h": -0.103, "growth_tmp": 71.0, "optimum_tmp": 66.666, "optimum_ph": 6.25, "genome_size": 1769907.259, "gc_content": 31.265, "coding_genes": 1877.75, "rRNA16S_genes": 4.0, "tRNA_genes": 49.333, "gram_stain": 0.0, "sporulation": 0.0, "motility": 0.0, "range_salinity": null, "facultative_respiration": 0.0, 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