{ "type": "genome", "identifier": "GCF_014202715.1", "organism": "Melissococcus plutonius", "title": "Melissococcus plutonius", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014202715.1", "bioproject": "PRJNA224116", "biosample": "SAMN14908526", "wgs_master": "JACHHL000000000.1", "refseq_category": "na", "taxid": "33970", "species_taxid": "33970", "organism_name": "Melissococcus plutonius", "infraspecific_name": "strain=DSM 29964", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/14", "asm_name": "ASM1420271v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_014202715.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/202/715/GCF_014202715.1_ASM1420271v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2032320", "genome_size_ungapped": "2032320", "gc_percent": "31.000000", "replicon_count": "0", "scaffold_count": "9", "contig_count": "9", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014202715.1-RS_2024_09_26", "annotation_date": "2024-09-26", "total_gene_count": "1834", "protein_coding_gene_count": "1660", "non_coding_gene_count": "60", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-14", "dateModified": "2020-08-14", "datePublished": "2020-08-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Melissococcus plutonius" ], "sample_taxid": [ "33970" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" ], "sample_host_location_id": [], "data_size": "0.562 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2032320", "Number of Sequences": "9", "Longest Sequences (bp)": "560208", "N50 (bp)": "326256", "Gap Ratio (%)": "0.000000", "GCcontent (%)": "31.1", "Number of CDSs": "1871", "Average Protein Length": "289.5", "Coding Ratio (%)": "79.9", "Number of rRNAs": "4", "Number of tRNAs": "52", "Number of CRISPRs": "0" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Melissococcus plutonius", "strain": "strain=DSM 29964", "accession": "GCA_014202715.1", "taxid": 33970, "species_taxid": 33970, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 671, "total_fragments": 671, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Melissococcus plutonius", "strain": "strain=ATCC 35311", "accession": "GCA_000270185.1", "taxid": 33970, "species_taxid": 33970, "relation_to_type": "type", "validated": true, "ani": 99.9942, "matched_fragments": 669, "total_fragments": 671, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Enterococcus termitis", "strain": "strain=LMG 8895", "accession": "GCA_001730305.1", "taxid": 332950, "species_taxid": 332950, "relation_to_type": "type", "validated": true, "ani": 77.3558, "matched_fragments": 94, "total_fragments": 671, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus ureilyticus", "strain": "strain=LMG 26676", "accession": "GCA_001730315.1", "taxid": 1131292, "species_taxid": 1131292, "relation_to_type": "type", "validated": true, "ani": 77.2232, "matched_fragments": 104, "total_fragments": 671, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Enterococcus 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