{ "type": "genome", "identifier": "GCF_014202765.1", "organism": "Silvimonas terrae", "title": "Silvimonas terrae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014202765.1", "bioproject": "PRJNA224116", "biosample": "SAMN14908548", "wgs_master": "JACHHN000000000.1", "refseq_category": "reference genome", "taxid": "300266", "species_taxid": "300266", "organism_name": "Silvimonas terrae", "infraspecific_name": "strain=DSM 18233", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/14", "asm_name": "ASM1420276v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_014202765.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/202/765/GCF_014202765.1_ASM1420276v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4826664", "genome_size_ungapped": "4826272", "gc_percent": "59.000000", "replicon_count": "0", "scaffold_count": "15", "contig_count": "15", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014202765.1-RS_2024_09_02", "annotation_date": "2024-09-02", "total_gene_count": "4401", "protein_coding_gene_count": "4314", "non_coding_gene_count": "58", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-14", "dateModified": "2020-08-14", "datePublished": "2020-08-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Silvimonas terrae" ], "sample_taxid": [ "300266" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "missing" 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"status": "conclusive" }, { "organism_name": "Silvimonas iriomotensis", "strain": "strain=CGMCC 1.8859", "accession": "GCA_014645535.1", "taxid": 449662, "species_taxid": 449662, "relation_to_type": "type", "validated": true, "ani": 85.3305, "matched_fragments": 1242, "total_fragments": 1600, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Silvimonas amylolytica", "strain": "strain=CGMCC 1.8860", "accession": "GCA_014645555.1", "taxid": 449663, "species_taxid": 449663, "relation_to_type": "type", "validated": true, "ani": 84.2587, "matched_fragments": 1198, "total_fragments": 1600, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Andreprevotia lacus", "strain": "strain=DSM 23236", "accession": "GCA_900176275.1", "taxid": 1121000, "species_taxid": 1121000, "relation_to_type": "type", "validated": true, "ani": 78.2483, "matched_fragments": 362, "total_fragments": 1600, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Andreprevotia chitinilytica", "strain": "strain=DSM 18519", "accession": "GCA_000711875.1", "taxid": 396808, "species_taxid": 396808, "relation_to_type": "type", "validated": true, "ani": 77.9706, "matched_fragments": 338, "total_fragments": 1600, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Jeongeupia chitinilytica", "strain": "strain=KCTC 23701", "accession": "GCA_014652315.1", "taxid": 1041641, "species_taxid": 1041641, "relation_to_type": "type", "validated": true, "ani": 77.8165, "matched_fragments": 287, "total_fragments": 1600, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinilyticum litopenaei", "strain": "strain=DSM 21440", "accession": "GCA_000428145.1", "taxid": 1121276, "species_taxid": 1121276, "relation_to_type": "type", "validated": true, "ani": 77.6754, "matched_fragments": 251, "total_fragments": 1600, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinilyticum piscinae", "strain": 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