{ "type": "genome", "identifier": "GCF_014202905.1", "organism": "Chitinivorax tropicus", "title": "Chitinivorax tropicus", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014202905.1", "bioproject": "PRJNA224116", "biosample": "SAMN14908342", "wgs_master": "JACHHY000000000.1", "refseq_category": "reference genome", "taxid": "714531", "species_taxid": "714531", "organism_name": "Chitinivorax tropicus", "infraspecific_name": "strain=DSM 27165", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/14", "asm_name": "ASM1420290v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_014202905.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/202/905/GCF_014202905.1_ASM1420290v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4405960", "genome_size_ungapped": "4405282", "gc_percent": "56.000000", "replicon_count": "0", "scaffold_count": "91", "contig_count": "91", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014202905.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "3900", "protein_coding_gene_count": "3771", "non_coding_gene_count": "61", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-14", "dateModified": "2020-08-14", "datePublished": "2020-08-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Chitinivorax tropicus" ], "sample_taxid": [ "714531" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"total_fragments": 1423, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Andreprevotia chitinilytica", "strain": "strain=DSM 18519", "accession": "GCA_000711875.1", "taxid": 396808, "species_taxid": 396808, "relation_to_type": "type", "validated": true, "ani": 76.6157, "matched_fragments": 89, "total_fragments": 1423, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Aquitalea magnusonii", "strain": "strain=DSM 25134", "accession": "GCA_003202035.1", "taxid": 332411, "species_taxid": 332411, "relation_to_type": "suspected-type", "validated": true, "ani": 76.4967, "matched_fragments": 110, "total_fragments": 1423, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Chitinilyticum piscinae", "strain": "strain=4Y14", "accession": "GCA_015223195.1", "taxid": 2866724, "species_taxid": 2866724, "relation_to_type": "type", "validated": true, "ani": 76.3912, "matched_fragments": 79, "total_fragments": 1423, "ani_threshold": 95, 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"vibrio_cell_shape": 0.0, "spiral_cell_shape": 0.0 }, "_genome_taxon": [ "Chitinivorax", "tropicus" ], "quality": 3, "quality_label": "\u2b50\ufe0f\u2b50\ufe0f\u2b50\ufe0f" }