{ "tc_result": [ { "organism_name": "Saccharothrix ecbatanensis", "strain": "strain=DSM 45486", "accession": "GCA_014205015.1", "taxid": 1105145, "species_taxid": 1105145, "relation_to_type": "type", "validated": true, "ani": 100.0, "matched_fragments": 3229, "total_fragments": 3229, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Saccharothrix deserti", "strain": "strain=BMP B8144", "accession": "GCA_009769385.1", "taxid": 2593674, "species_taxid": 2593674, "relation_to_type": "type", "validated": true, "ani": 88.6009, "matched_fragments": 2105, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix carnea", "strain": "strain=CGMCC 4.7097", "accession": "GCA_003014735.1", "taxid": 1280637, "species_taxid": 1280637, "relation_to_type": "type", "validated": true, "ani": 87.7808, "matched_fragments": 2089, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix texasensis", "strain": "strain=DSM 44231", "accession": "GCA_003752005.1", "taxid": 103734, "species_taxid": 103734, "relation_to_type": "type", "validated": true, "ani": 87.4971, "matched_fragments": 2075, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix saharensis", "strain": "strain=DSM 45456", "accession": "GCA_006716745.1", "taxid": 571190, "species_taxid": 571190, "relation_to_type": "type", "validated": true, "ani": 87.2278, "matched_fragments": 2048, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix syringae", "strain": "strain=NRRL B-16468", "accession": "GCA_009498035.1", "taxid": 103733, "species_taxid": 103733, "relation_to_type": "type", "validated": true, "ani": 84.1685, "matched_fragments": 1940, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix australiensis", "strain": "strain=DSM 43800", "accession": "GCA_003634935.1", "taxid": 2072, "species_taxid": 2072, "relation_to_type": "type", "validated": true, "ani": 83.2183, "matched_fragments": 1532, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix algeriensis", "strain": "strain=DSM 44581", "accession": "GCA_016907655.1", "taxid": 173560, "species_taxid": 173560, "relation_to_type": "type", "validated": true, "ani": 83.1377, "matched_fragments": 1462, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix espanaensis", "strain": "strain=type strain: DSM 44229", "accession": "GCA_000328705.1", "taxid": 103731, "species_taxid": 103731, "relation_to_type": "type", "validated": true, "ani": 83.0691, "matched_fragments": 1657, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Saccharothrix obliqua", "strain": "strain=SC076", "accession": "GCA_019375475.1", "taxid": 2861747, "species_taxid": 2861747, "relation_to_type": "type", "validated": true, "ani": 82.7525, "matched_fragments": 1462, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea tibetensis", "strain": "strain=FXJ1.1311", "accession": "GCA_007845675.1", "taxid": 2591470, "species_taxid": 2591470, "relation_to_type": "type", "validated": true, "ani": 80.3247, "matched_fragments": 1293, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea albidocapillata subsp. violacea", "strain": "strain=DSM 44796", "accession": "GCA_900100275.1", "taxid": 128104, "species_taxid": 40571, "relation_to_type": "type", "validated": true, "ani": 80.0029, "matched_fragments": 1307, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea flava", "strain": "strain=DSM 43885", "accession": "GCA_024171845.1", "taxid": 103732, "species_taxid": 103732, "relation_to_type": "type", "validated": true, "ani": 79.9628, "matched_fragments": 1354, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Lentzea aerocolonigenes", "strain": "strain=DSM 40034", "accession": "GCA_024171805.1", "taxid": 68170, "species_taxid": 68170, "relation_to_type": "type", "validated": true, "ani": 79.9106, "matched_fragments": 1385, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Amycolatopsis camponoti", "strain": "strain=A23", "accession": "GCA_902497555.1", "taxid": 2606593, "species_taxid": 2606593, "relation_to_type": "type", "validated": true, "ani": 77.9922, "matched_fragments": 1066, "total_fragments": 3229, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 2.78, "strain_heterogeneity": 0.0 }, "gtdb_result": [ { "accession": "GCF_014205015.1", "gtdb_species": "s__Actinosynnema 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88.6101, "matched_fragments": 2100, "total_fragments": 3229, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001984175.1", "gtdb_species": "s__Actinosynnema sp001984175", "ani": 88.3215, "matched_fragments": 2042, "total_fragments": 3229, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_001280085.1", "gtdb_species": "s__Actinosynnema sp001280085", "ani": 87.9844, "matched_fragments": 2196, "total_fragments": 3229, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003014735.1", "gtdb_species": "s__Actinosynnema carneum", "ani": 87.7785, "matched_fragments": 2088, "total_fragments": 3229, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "95.10", "min_intra_species_ani": "95.10", "mean_intra_species_af": "0.83", "min_intra_species_af": "0.83", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_003752005.1", "gtdb_species": "s__Actinosynnema texasense", "ani": 87.5128, "matched_fragments": 2073, "total_fragments": 3229, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "98.51", "min_intra_species_ani": "98.51", "mean_intra_species_af": "0.92", "min_intra_species_af": "0.92", "num_clustered_genomes": 2, "status": "-" }, { "accession": "GCF_006716745.1", "gtdb_species": "s__Actinosynnema saharense", "ani": 87.2248, "matched_fragments": 2047, "total_fragments": 3229, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_003634935.1", "gtdb_species": "s__Actinosynnema australiense", "ani": 83.1651, "matched_fragments": 1538, "total_fragments": 3229, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_016907655.1", "gtdb_species": "s__Actinosynnema algeriensis", "ani": 83.1279, "matched_fragments": 1464, "total_fragments": 3229, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" }, { "accession": "GCF_000328705.1", "gtdb_species": "s__Actinosynnema espanaense", "ani": 83.041, "matched_fragments": 1665, "total_fragments": 3229, "gtdb_taxonomy": "d__Bacteria;p__Actinobacteriota;c__Actinomycetia;o__Mycobacteriales;f__Pseudonocardiaceae;g__Actinosynnema", "ani_circumscription_radius": 95.0, "mean_intra_species_ani": "N/A", "min_intra_species_ani": "N/A", "mean_intra_species_af": "N/A", "min_intra_species_af": "N/A", "num_clustered_genomes": 1, "status": "-" } ] }