# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence01:1282..1482(+)	frameshift,internal_stop_codon	1501..1503(+)	1461,1623	WP_010890314.1	class I SAM-dependent DNA methyltransferase	83.3	4.3	65.5
MGA_2	LOCUS_00020	sequence01:2021..2215(-)	frameshift,internal_stop_codon	1764..1766(-)	2041,2258,1780,1858	WP_010890314.1	class I SAM-dependent DNA methyltransferase	92.2	4.6	81.4
MGA_3	LOCUS_00030	sequence01:2299..2472(+)	frameshift,internal_stop_codon	2470..2472(+)	2592,2729,2512	WP_010890314.1	class I SAM-dependent DNA methyltransferase	93.0	4.1	73.6
MGA_4	LOCUS_00040	sequence01:2714..3076(+)	frameshift,internal_stop_codon	2470..2472(+)	2592	WP_010890314.1	class I SAM-dependent DNA methyltransferase	100.0	9.2	75.8
MGA_102	LOCUS_01020	sequence01:117671..117853(+)	partial			WP_010889814.1	ABC transporter permease	100.0	18.4	100.0
MGA_231	LOCUS_02310	sequence01:266164..266316(-)	partial			WP_002658128.1	hypothetical protein	68.0	68.0	100.0
MGA_319	LOCUS_03190	sequence01:373768..373980(-)	frameshift,internal_stop_codon	374090..374092(-),374078..374080(-),373996..373998(-)	373700,374020,373479,373707,373612,373684,373563,373791	WP_002658001.1	inositol monophosphatase	92.9	22.9	81.5
MGA_320	LOCUS_03200	sequence01:374090..374287(-)	frameshift,internal_stop_codon	374090..374092(-),374078..374080(-),373996..373998(-)	374020	WP_002658001.1	inositol monophosphatase	56.9	13.0	91.9
MGA_413	LOCUS_04130	sequence02:1..1395(+)	partial			WP_020948717.1	surface-located membrane protein Lmp1	97.0	40.2	92.4
MGA_426	LOCUS_04260	sequence02:14526..14753(-)	partial			WP_010890332.1	SIMPL domain-containing protein	76.0	24.7	59.6
MGA_570	LOCUS_05700	sequence02:169091..169654(-)	partial			WP_010889737.1	hypothetical protein	100.0	73.3	97.3
MGA_575	LOCUS_05750	sequence02:173514..173795(-)	frameshift		173809	WP_002665195.1	hypothetical protein	100.0	42.3	87.1
MGA_576	LOCUS_05760	sequence02:173783..174175(-)	frameshift		173815	WP_002665195.1	hypothetical protein	89.2	52.7	87.1
MGA_630	LOCUS_06290	sequence03:15222..15470(-)	partial			WP_002658367.1	rhodanese-like domain-containing protein	100.0	65.9	93.9
MGA_685	LOCUS_06840	sequence03:70247..71095(+)	frameshift		70071	WP_014540570.1	peptide chain release factor 2	100.0	78.6	95.7
MGA_809	LOCUS_08080	sequence03:203132..203899(+)	partial			WP_002656686.1	hemolysin family protein	100.0	61.9	98.4
MGA_824	LOCUS_08220	sequence04:7024..7194(-)	partial			WP_010257151.1	Lp6.6 family lipoprotein	78.6	64.7	95.5
MGA_827	LOCUS_08250	sequence04:9314..9547(+)	partial			WP_010890394.1	hypothetical protein	74.0	69.6	66.7
MGA_867	LOCUS_08650	sequence04:40972..41151(-)	partial			WP_010258115.1	BlyA family holin	67.8	67.8	97.5
MGA_878	LOCUS_08760	sequence05:721..873(+)	frameshift		861	WP_010883949.1	plasmid maintenance protein	86.0	35.2	65.1
MGA_879	LOCUS_08770	sequence05:1497..1781(+)	frameshift		1652,1844,1655	WP_010883946.1	plasmid maintenance protein	56.4	14.4	66.0
MGA_880	LOCUS_08780	sequence05:1898..2245(+)	frameshift		1676,1661,1844	WP_010890608.1	plasmid maintenance protein	79.1	26.8	45.5
MGA_881	LOCUS_08790	sequence05:2188..2643(+)	partial			WP_010890331.1	lipoprotein P35	97.4	55.5	66.0
MGA_883	LOCUS_08810	sequence05:5327..5752(+)	frameshift,internal_stop_codon	5122..5124(+),5303..5305(+),5107..5109(+)	5241,5719	WP_010890331.1	lipoprotein P35	94.3	50.2	57.9
MGA_910	LOCUS_09060	sequence05:29887..30312(-)	frameshift,internal_stop_codon	30515..30517(-),30334..30336(-),30530..30532(-)	30397,29919	WP_010890331.1	lipoprotein P35	94.3	50.2	57.9
MGA_912	LOCUS_09080	sequence05:32996..33451(-)	partial			WP_010890331.1	lipoprotein P35	97.4	55.5	66.0
MGA_913	LOCUS_09090	sequence05:33394..33741(-)	frameshift		33977,33962,33794	WP_010890608.1	plasmid maintenance protein	79.1	26.8	45.5
MGA_914	LOCUS_09100	sequence05:33858..34142(-)	frameshift		33986,33794,33983	WP_010883946.1	plasmid maintenance protein	56.4	14.4	66.0
MGA_915	LOCUS_09110	sequence05:34766..34918(-)	frameshift		34777	WP_010883949.1	plasmid maintenance protein	86.0	35.2	65.1
MGA_948	LOCUS_09420	sequence07:5752..6744(+)	partial			WP_010890325.1	virulence associated lipoprotein	60.3	44.1	62.1
MGA_962	LOCUS_09550	sequence07:23026..23238(+)	frameshift		23256,23301,23199	WP_010890336.1	P52 family lipoprotein	82.9	29.3	58.6
MGA_964	LOCUS_09570	sequence07:24009..24233(+)	frameshift,internal_stop_codon	24000..24002(+),24231..24233(+),23979..23981(+)	24242,24278	WP_010259844.1	Bdr family repetitive protein	93.2	31.1	76.8
MGA_966	LOCUS_09590	sequence07:24680..25144(-)	frameshift,internal_stop_codon	24680..24682(-)	24570,24613	WP_010890304.1	hypothetical protein	94.2	57.1	74.5
MGA_969	LOCUS_09610	sequence08:3101..3241(+)	partial			WP_010890327.1	complement regulator-acquiring protein	67.4	10.8	96.8
MGA_971	LOCUS_09630	sequence08:4425..4682(-)	partial			WP_010883947.1	P52 family lipoprotein	97.6	58.7	72.6
MGA_972	LOCUS_09640	sequence08:5072..5371(-)	frameshift,internal_stop_codon	5381..5383(-),5072..5074(-)	5432,5059	WP_010258133.1	chromosome replication/partitioning protein	100.0	52.5	41.4
MGA_975	LOCUS_09670	sequence08:6549..6683(-)	frameshift		6742	WP_002657148.1	chromosome replication/partitioning protein	97.7	22.1	69.8
MGA_976	LOCUS_09680	sequence08:7363..7761(-)	frameshift		7201,7814	WP_010890314.1	class I SAM-dependent DNA methyltransferase	100.0	10.4	66.9
MGA_977	LOCUS_09690	sequence08:9851..10072(-)	frameshift		10089,9861,10198	WP_002557320.1	c-di-GMP-binding receptor PlzA	91.8	25.7	63.2
MGA_979	LOCUS_09710	sequence08:10961..11272(-)	frameshift,internal_stop_codon	11518..11520(-)	11307	WP_010890332.1	SIMPL domain-containing protein	100.0	44.6	92.2
MGA_980	LOCUS_09720	sequence08:11299..11478(-)	frameshift,internal_stop_codon	11518..11520(-)	11313	WP_010890332.1	SIMPL domain-containing protein	100.0	25.5	86.4
MGA_981	LOCUS_09730	sequence08:11518..11658(-)	frameshift,internal_stop_codon	11518..11520(-)	11313	WP_010890332.1	SIMPL domain-containing protein	100.0	19.9	67.4
MGA_986	LOCUS_09780	sequence08:17132..17311(+)	frameshift,internal_stop_codon	17098..17100(+),17310..17312(+)	16970,17052,17133,17143	WP_010890604.1	exported protein A EppA	93.2	31.0	58.2
MGA_988	LOCUS_09800	sequence08:19908..20141(-)	frameshift,internal_stop_codon	20168..20170(-),19816..19818(-)	20209,19948	WP_014023153.1	P13 family porin	85.7	42.5	53.5
MGA_990	LOCUS_09820	sequence08:21724..21996(+)	partial			WP_010890254.1	plasmid maintenance protein	93.3	25.1	41.9
MGA_994	LOCUS_09860	sequence08:23156..23578(+)	frameshift,internal_stop_codon	23721..23723(+)	23682,23634,23476,23205,23398,23561,23695	WP_010890290.1	DnaB helicase C-terminal domain-containing protein	97.9	51.3	43.0
MGA_1009	LOCUS_10000	sequence09:16972..17145(+)	partial			WP_010258956.1	ParA family protein	100.0	22.6	93.0
MGA_1010	LOCUS_10010	sequence09:17492..17686(+)	frameshift,internal_stop_codon	17482..17484(+),17283..17285(+),17307..17309(+),17253..17255(+)	17667,17427,17541,17351	WP_010890263.1	chromosome replication/partitioning protein	75.0	24.9	72.9
MGA_1013	LOCUS_10040	sequence09:21176..21379(+)	frameshift,internal_stop_codon	21652..21654(+),21571..21573(+)	21137,21621,21356,21055,21534,21423	WP_010883927.1	DNA methyltransferase	92.5	5.8	47.6
MGA_1032	LOCUS_10200	sequence11:1230..2228(-)	partial			WP_010883925.1	laminin-binding protein ErpX	43.7	42.3	71.9
MGA_1041	LOCUS_10290	sequence11:9650..10198(+)	internal_stop_codon	10199..10201(+),10196..10198(+)		WP_014017690.1	ERF family protein	100.0	53.7	90.7
MGA_1054	LOCUS_10410	sequence12:6777..7733(+)	internal_stop_codon	7731..7733(+)		WP_010883738.1	DUF244 domain-containing protein	100.0	72.3	81.8
MGA_1055	LOCUS_10420	sequence12:7818..8099(+)	internal_stop_codon	7731..7733(+)		WP_010883738.1	DUF244 domain-containing protein	100.0	21.1	82.8
MGA_1057	LOCUS_10440	sequence12:8582..8998(-)	frameshift		8984	WP_010883761.1	site-specific integrase	97.8	52.3	96.3
MGA_1058	LOCUS_10450	sequence12:8964..9359(-)	frameshift		8990	WP_010883761.1	site-specific integrase	96.2	48.8	74.6
MGA_1062	LOCUS_10480	sequence13:473..1003(-)	frameshift		1143	WP_010883930.1	DUF787 family protein	99.4	47.3	93.1
MGA_1063	LOCUS_10490	sequence13:1012..1230(-)	frameshift		1143	WP_010883930.1	DUF787 family protein	76.4	14.3	49.1
MGA_1067	LOCUS_10530	sequence13:3910..4455(-)	frameshift		4498	WP_010883738.1	DUF244 domain-containing protein	100.0	41.0	81.8
MGA_1068	LOCUS_10540	sequence13:4493..5236(-)	frameshift		4501	WP_002658616.1	DUF244 domain-containing protein	99.6	55.8	88.2
MGA_1078	LOCUS_10630	sequence14:3569..3772(-)	partial			WP_010883737.1	Bdr family repetitive protein	100.0	28.6	65.7
MGA_1085	LOCUS_10680	sequence15:335..919(-)	internal_stop_codon	1073..1075(-)		WP_010883823.1	DUF228 domain-containing protein	94.8	71.0	82.1
MGA_1086	LOCUS_10690	sequence15:1133..>2022(-)	partial			WP_010883836.1	PBSX family phage terminase large subunit	53.9	35.3	93.7
MGA_1091	LOCUS_10730	sequence17:242..925(-)	frameshift,internal_stop_codon	164..166(-)	274	WP_010883797.1	DUF693 family protein	97.4	70.9	92.4
MGA_1093	LOCUS_10750	sequence17:1601..1870(-)	partial			WP_010883894.1	DUF759 family protein	57.3	12.0	60.8
MGA_1100	LOCUS_10790	sequence19:552..908(+)	frameshift		896	WP_010883777.1	DUF276 domain-containing protein	100.0	40.5	87.3
MGA_1101	LOCUS_10800	sequence19:1013..1432(+)	frameshift		902	WP_010883841.1	DUF276 domain-containing protein	100.0	47.6	77.0
MGA_1109	LOCUS_10830	sequence23:2..265(+)	partial			WP_010883894.1	DUF759 family protein	100.0	21.9	46.3
