{ "type": "genome", "identifier": "GCF_014207355.1", "organism": "Mesorhizobium sangaii", "title": "Mesorhizobium sangaii", "description": "na", "data type": "Genome sequencing and assembly", "organization": "DOE Joint Genome Institute", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014207355.1", "bioproject": "PRJNA224116", "biosample": "SAMN14908382", "wgs_master": "JACHEF000000000.1", "refseq_category": "reference genome", "taxid": "505389", "species_taxid": "505389", "organism_name": "Mesorhizobium sangaii", "infraspecific_name": "strain=DSM 100039", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/14", "asm_name": "ASM1420735v1", "asm_submitter": "DOE Joint Genome Institute", "gbrs_paired_asm": "GCA_014207355.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/207/355/GCF_014207355.1_ASM1420735v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "7212754", "genome_size_ungapped": "7211975", "gc_percent": "62.500000", "replicon_count": "0", "scaffold_count": "39", "contig_count": "39", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014207355.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "6985", "protein_coding_gene_count": "6686", "non_coding_gene_count": "59", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-14", "dateModified": "2020-08-14", "datePublished": "2020-08-14", "_annotation": { "sample_count": 1, "sample_organism": [ "Mesorhizobium sangaii" ], "sample_taxid": [ "505389" ], "sample_host_organism": [ "not applicable" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], 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"total_fragments": 2386, "ani_threshold": 95, "status": "conclusive" }, { "organism_name": "Mesorhizobium sophorae", "strain": "strain=ICMP 19535", "accession": "GCA_002270415.1", "taxid": 1300294, "species_taxid": 1300294, "relation_to_type": "type", "validated": true, "ani": 94.4109, "matched_fragments": 1974, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium norvegicum", "strain": "strain=10.2.2", "accession": "GCA_004919685.1", "taxid": 1085774, "species_taxid": 1085774, "relation_to_type": "type", "validated": true, "ani": 89.8135, "matched_fragments": 1676, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium loti", "strain": "strain=DSM 2626", "accession": "GCA_003148495.1", "taxid": 381, "species_taxid": 381, "relation_to_type": "suspected-type", "validated": true, "ani": 89.5839, "matched_fragments": 1664, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium qingshengii", "strain": "strain=CGMCC 1.12097", "accession": "GCA_900103325.1", "taxid": 1165689, "species_taxid": 1165689, "relation_to_type": "type", "validated": true, "ani": 89.0074, "matched_fragments": 1594, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium opportunistum", "strain": "strain=WSM2075", "accession": "GCA_000176035.2", "taxid": 593909, "species_taxid": 593909, "relation_to_type": "type", "validated": true, "ani": 87.5745, "matched_fragments": 1580, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium comanense", "strain": "strain=3P27G6", "accession": "GCA_005503535.1", "taxid": 2502215, "species_taxid": 2502215, "relation_to_type": "type", "validated": true, "ani": 86.1151, "matched_fragments": 1511, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium metallidurans", "strain": "strain=STM 2683", "accession": "GCA_000350085.1", "taxid": 489722, "species_taxid": 489722, "relation_to_type": "type", "validated": true, "ani": 86.0423, "matched_fragments": 1364, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium waimense", "strain": "strain=ICMP19557", "accession": "GCA_003601975.1", "taxid": 1300307, "species_taxid": 1300307, "relation_to_type": "type", "validated": true, "ani": 85.9318, "matched_fragments": 1604, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Mesorhizobium onobrychidis", "strain": "strain=OM4", "accession": "GCA_024707545.1", "taxid": 2775404, "species_taxid": 2775404, "relation_to_type": "type", "validated": true, "ani": 85.254, "matched_fragments": 1419, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudaminobacter soli", "strain": "strain=HC19", "accession": "GCA_014595955.1", "taxid": 2831468, "species_taxid": 2831468, "relation_to_type": "type", "validated": true, "ani": 79.0268, "matched_fragments": 691, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Pseudaminobacter soli", "strain": "strain=19-2017", "accession": "GCA_018310375.1", "taxid": 2831468, "species_taxid": 2831468, "relation_to_type": "type", "validated": true, "ani": 79.021, "matched_fragments": 691, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Nitratireductor arenosus", "strain": "strain=CAU 1489", "accession": "GCA_009742725.1", "taxid": 2682096, "species_taxid": 2682096, "relation_to_type": "type", "validated": true, "ani": 78.9952, "matched_fragments": 621, "total_fragments": 2386, "ani_threshold": 95, "status": "below_threshold" } ], "cc_result": { "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0 }, 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