# locus_id	locus_tag	location	classification	internal_stop	indel	ref_id	description	query_cov	ref_cov	identity
MGA_1	LOCUS_00010	sequence01:607..3384(+)	partial			WP_010886165.1	PE family protein	83.5	41.5	22.8
MGA_42	LOCUS_00420	sequence01:42733..44184(+)	partial			WP_010989431.1	LXG domain-containing protein	75.8	74.5	86.3
MGA_79	LOCUS_00790	sequence01:74968..75204(+)	partial			WP_011727967.1	hypothetical protein	98.7	6.1	54.5
MGA_81	LOCUS_00810	sequence01:75615..75878(+)	internal_stop_codon	75546..75548(+)		WP_009933589.1	hypothetical protein	100.0	75.0	92.0
MGA_82	LOCUS_00820	sequence01:76032..76529(+)	partial			WP_010989355.1	T7SS effector LXG polymorphic toxin	86.7	31.0	85.3
MGA_83	LOCUS_00830	sequence01:76647..76781(+)	partial			WP_009933725.1	DUF1871 family protein	95.5	52.5	88.1
MGA_84	LOCUS_00840	sequence01:76914..77069(+)	partial			WP_008946553.1	hypothetical protein	98.0	41.3	88.0
MGA_94	LOCUS_00940	sequence01:87854..88633(+)	partial			WP_034349500.1	serine hydrolase	73.7	72.5	30.8
MGA_97	LOCUS_00970	sequence01:91348..93114(+)	partial			WP_010989363.1	LPXTG cell wall anchor domain-containing protein	86.7	64.3	83.7
MGA_218	LOCUS_02170	sequence02:64195..64890(-)	internal_stop_codon	64960..64962(-)		WP_003723215.1	YafY family protein	99.6	73.2	81.7
MGA_219	LOCUS_02180	sequence02:64960..65142(-)	internal_stop_codon	64960..64962(-)		WP_003723215.1	YafY family protein	100.0	19.1	90.0
MGA_229	LOCUS_02280	sequence02:74428..76254(-)	partial			WP_010989462.1	class 1 internalin InlA	84.7	64.4	47.7
MGA_251	LOCUS_02500	sequence02:91735..92310(-)	frameshift,internal_stop_codon	92286..92288(-)	92282	WP_011393817.1	DUF4127 family protein	83.8	29.9	25.0
MGA_252	LOCUS_02510	sequence02:92286..93260(-)	frameshift,internal_stop_codon	92286..92288(-)	92282	WP_011393817.1	DUF4127 family protein	96.3	59.3	36.1
MGA_385	LOCUS_03840	sequence03:104855..105145(-)	partial			WP_002672474.1	immunity 53 family protein	91.7	69.7	39.8
MGA_387	LOCUS_03860	sequence03:106089..107504(-)	partial			WP_010989452.1	class 1 internalin InlF	45.0	25.9	32.4
MGA_422	LOCUS_04210	sequence04:31342..31476(-)	partial			WP_010989791.1	hypothetical protein	100.0	23.2	86.4
MGA_488	LOCUS_04870	sequence05:9423..9593(+)	frameshift		9545	WP_009926588.1	DUF2004 domain-containing protein	73.2	24.6	75.6
MGA_489	LOCUS_04880	sequence05:9653..9925(+)	frameshift		9545	WP_009926588.1	DUF2004 domain-containing protein	98.9	53.3	78.7
MGA_493	LOCUS_04920	sequence05:13592..14140(-)	partial			WP_000449124.1	DUF4240 domain-containing protein	89.6	65.0	34.9
MGA_504	LOCUS_05030	sequence05:27307..27459(+)	internal_stop_codon	27304..27306(+)		WP_010989429.1	DUF3130 domain-containing protein	100.0	53.2	92.0
MGA_506	LOCUS_05050	sequence05:27825..29294(+)	partial			WP_010989431.1	LXG domain-containing protein	74.2	73.9	90.1
MGA_509	LOCUS_05080	sequence05:30355..30606(+)	internal_stop_codon	30604..30606(+)		WP_010989431.1	LXG domain-containing protein	96.4	16.3	81.2
MGA_510	LOCUS_05090	sequence05:30669..31133(+)	internal_stop_codon	30604..30606(+)		WP_010989431.1	LXG domain-containing protein	35.1	11.6	61.4
MGA_559	LOCUS_05580	sequence05:73385..73627(+)	partial			WP_012545291.1	type I-B CRISPR-associated endonuclease Cas1b	100.0	24.6	50.0
MGA_603	LOCUS_06020	sequence06:36313..38088(+)	partial			WP_010989452.1	class 1 internalin InlF	88.0	63.8	42.8
MGA_607	LOCUS_06060	sequence06:40908..42245(+)	partial			WP_010989390.1	ABC transporter permease subunit	100.0	70.9	93.0
MGA_633	LOCUS_06310	sequence07:282..545(+)	partial			WP_103365834.1	recombinase family protein	94.3	41.0	62.2
MGA_642	LOCUS_06400	sequence07:7430..9739(-)	partial			WP_010989462.1	class 1 internalin InlA	34.5	30.8	33.0
MGA_644	LOCUS_06420	sequence07:12028..12702(-)	partial			WP_010989452.1	class 1 internalin InlF	60.7	16.8	35.2
MGA_645	LOCUS_06430	sequence07:13474..13773(-)	internal_stop_codon	13792..13794(-)		WP_011016078.1	Fic family protein	96.0	22.9	37.9
MGA_657	LOCUS_06550	sequence07:24879..25598(-)	partial			WP_011461870.1	DUF4065 domain-containing protein	64.4	45.3	34.2
MGA_684	LOCUS_06800	sequence07:47252..50005(-)	partial			WP_010989452.1	class 1 internalin InlF	47.9	54.8	29.8
MGA_694	LOCUS_06900	sequence07:59488..60321(-)	partial			WP_001106654.1	hypothetical protein	56.7	79.9	31.4
MGA_696	LOCUS_06920	sequence07:61014..61499(-)	partial			WP_010989987.1	hypothetical protein	66.5	60.7	41.4
MGA_698	LOCUS_06940	sequence07:62789..64258(-)	partial			WP_011035595.1	hypothetical protein	31.7	56.3	34.4
MGA_756	LOCUS_07500	sequence10:1..561(+)	partial			WP_009932257.1	Crp/Fnr family transcriptional regulator	95.2	72.8	74.6
MGA_774	LOCUS_07680	sequence10:16982..17158(+)	partial			WP_003722274.1	hypothetical protein	48.3	48.3	96.4
MGA_835	LOCUS_08280	sequence11:52571..54670(+)	partial			WP_003358861.1	WG repeat-containing protein	24.3	52.5	28.3
MGA_937	LOCUS_09300	sequence11:158546..158683(-)	partial			WP_003727979.1	hypothetical protein	71.1	71.1	100.0
MGA_1042	LOCUS_10350	sequence11:268064..269416(+)	partial			WP_000161220.1	trypsin-like serine protease	62.9	80.7	35.7
MGA_1114	LOCUS_11070	sequence11:342102..344552(+)	partial			WP_010989814.1	LPXTG cell wall anchor domain-containing protein	27.8	25.1	91.6
MGA_1188	LOCUS_11800	sequence13:28235..28390(-)	partial			WP_009931899.1	nitronate monooxygenase	80.4	13.3	61.0
MGA_1211	LOCUS_12020	sequence15:1375..1863(-)	frameshift,internal_stop_codon	1374..1376(-)	1578,1508,1213	WP_005693372.1	ATP-binding protein	100.0	47.2	43.2
MGA_1214	LOCUS_12050	sequence15:5696..8068(+)	partial			WP_010989462.1	class 1 internalin InlA	37.5	38.2	44.0
MGA_1224	LOCUS_12150	sequence15:14219..14572(-)	frameshift,internal_stop_codon	14219..14221(-),14168..14170(-),14610..14612(-)	14640,14561,14758	WP_011222049.1	Tn3 family transposase	89.7	10.5	82.9
MGA_1225	LOCUS_12160	sequence15:14732..14956(-)	frameshift,internal_stop_codon	14608..14610(-),15130..15132(-)	14931,14756,15207,15084,14638,14559	WP_011222049.1	Tn3 family transposase	82.4	6.1	62.3
MGA_1230	LOCUS_12210	sequence15:20748..21629(+)	partial			WP_002262113.1	GHKL domain-containing protein	86.0	56.7	38.1
MGA_1249	LOCUS_12380	sequence16:10636..12036(+)	partial			WP_010989340.1	LXG domain-containing protein	53.2	48.4	41.8
MGA_1264	LOCUS_12530	sequence17:3555..12812(-)	partial			WP_051754043.1	polymorphic toxin-type HINT domain-containing protein	38.1	35.6	27.1
MGA_1266	LOCUS_12550	sequence17:13659..13850(-)	partial			WP_010990060.1	D-alanyl-D-alanine carboxypeptidase PBPD1	100.0	14.2	88.9
MGA_1267	LOCUS_12560	sequence17:14030..14281(+)	partial			WP_003732112.1	ABC transporter ATP-binding protein	75.9	10.2	85.7
MGA_1275	LOCUS_12640	sequence18:5522..6457(-)	partial			WP_003722637.1	peptidoglycan DD-metalloendopeptidase family protein	43.4	31.0	50.4
MGA_1276	LOCUS_12650	sequence18:6444..8372(-)	partial			WP_011109604.1	MAEBL family membrane protein	68.2	59.4	20.5
MGA_1278	LOCUS_12670	sequence18:10894..11298(-)	partial			WP_009966628.1	conjugal transfer protein	91.0	71.3	33.9
MGA_1281	LOCUS_12700	sequence18:12680..14545(-)	partial			WP_011109552.1	SpaA isopeptide-forming pilin-related protein	43.2	18.5	33.3
MGA_1295	LOCUS_12820	sequence20:1493..1762(+)	frameshift		1759	WP_010989586.1	IS3 family transposase	100.0	32.0	97.8
MGA_1296	LOCUS_12830	sequence20:1738..1917(+)	frameshift		1759	WP_010989424.1	IS3 family transposase	94.9	20.7	75.0
MGA_1297	LOCUS_12840	sequence20:2041..2361(-)	partial			WP_011459154.1	helix-turn-helix domain-containing protein	95.3	73.2	43.6
MGA_1310	LOCUS_12970	sequence20:9160..9729(+)	frameshift		9854	WP_141741171.1	IS3 family transposase	73.0	30.0	52.8
MGA_1311	LOCUS_12980	sequence20:9621..9896(+)	frameshift		9854	WP_141741171.1	IS3 family transposase	78.0	15.0	63.4
MGA_1312	LOCUS_12990	sequence20:9859..10212(+)	frameshift		9854	WP_141741171.1	IS3 family transposase	100.0	24.7	67.5
MGA_1317	LOCUS_13030	sequence21:7426..7830(+)	partial			WP_000402394.1	helix-turn-helix transcriptional regulator	88.8	60.9	37.5
MGA_1383	LOCUS_13690	sequence22:62179..63597(-)	partial			WP_010990070.1	PTS beta-glucoside transporter subunit IIBCA	100.0	72.5	47.9
MGA_1400	LOCUS_13860	sequence22:80050..80262(+)	partial			WP_003721846.1	LPXTG cell wall anchor domain-containing protein	71.4	71.4	70.0
MGA_1463	LOCUS_14490	sequence22:134017..135660(-)	partial			WP_010989982.1	lmo2396 family class 1 internalin	26.7	13.6	39.0
MGA_1465	LOCUS_14510	sequence22:136697..139177(-)	partial			WP_010989427.1	class 1 internalin InlI	54.5	24.7	36.2
MGA_1524	LOCUS_15100	sequence22:195357..196691(+)	partial			WP_003147473.1	Ig-like domain-containing protein	65.5	12.4	26.7
MGA_1624	LOCUS_16060	sequence25:2250..3533(+)	partial			WP_015613327.1	GHKL domain-containing protein	71.7	73.5	25.3
MGA_1641	LOCUS_16200	sequence27:3555..4313(+)	partial			WP_000175234.1	type II CAAX endopeptidase family protein	63.9	73.2	31.3
MGA_1673	LOCUS_16480	sequence31:1761..4169(-)	partial			WP_003358861.1	WG repeat-containing protein	33.7	82.2	24.8
MGA_1720	LOCUS_16930	sequence33:49405..49560(+)	partial			WP_010989761.1	hypothetical protein	100.0	70.8	64.7
MGA_1782	LOCUS_17550	sequence33:120355..120594(+)	partial			WP_010989739.1	A24 family peptidase	100.0	33.5	70.9
MGA_1851	LOCUS_18240	sequence33:188365..189168(+)	partial			WP_010990137.1	DNA internalization-related competence protein ComEC/Rec2	99.6	35.9	87.6
MGA_1926	LOCUS_18940	sequence37:1..1722(+)	partial			WP_002263549.1	type II CRISPR RNA-guided endonuclease Cas9	99.1	43.0	60.6
MGA_1933	LOCUS_18990	sequence41:80..1417(+)	partial			WP_003732088.1	GW domain-containing glycosaminoglycan-binding protein	37.3	54.2	45.0
MGA_1940	LOCUS_19040	sequence44:3711..5072(+)	partial			WP_000215932.1	SIR2 family protein	48.3	42.0	27.2
MGA_1948	LOCUS_19120	sequence44:11669..12823(-)	partial			WP_003243463.1	teichoic acid poly(glycerol phosphate) polymerase	99.0	51.3	56.8
MGA_1952	LOCUS_19160	sequence44:16149..18500(-)	partial			WP_010989657.1	CDP-glycerol glycerophosphotransferase family protein	62.8	67.8	39.0
MGA_1956	LOCUS_19200	sequence44:22553..24832(-)	partial			WP_003243594.1	beta-N-acetylglucosaminidase LytD	40.2	32.4	43.9
MGA_1966	LOCUS_19300	sequence44:37546..39366(+)	partial			WP_010990014.1	autolysin Ami	53.8	35.7	43.5
MGA_2023	LOCUS_19870	sequence44:89127..89339(+)	partial			WP_003722866.1	YkvS family protein	85.7	63.8	100.0
MGA_2209	LOCUS_21640	sequence55:26468..26590(-)	frameshift		26607	WP_010990076.1	DUF1310 domain-containing protein	100.0	31.7	97.5
MGA_2210	LOCUS_21650	sequence55:26599..26808(-)	frameshift		26607	WP_010990076.1	DUF1310 domain-containing protein	97.1	53.2	86.6
MGA_2310	LOCUS_22650	sequence55:134628..138212(+)	frameshift		138173	WP_010989330.1	type VII secretion protein EssC	99.1	78.9	86.8
MGA_2311	LOCUS_22660	sequence55:138242..139108(+)	frameshift		138182	WP_000436727.1	type VII secretion protein EssC	99.0	19.0	26.5
MGA_2326	LOCUS_22810	sequence55:153774..156704(+)	partial			WP_001178115.1	SpaA isopeptide-forming pilin-related protein	63.4	22.9	28.5
MGA_2338	LOCUS_22930	sequence55:168491..169576(+)	partial			WP_009968231.1	peptidoglycan DL-endopeptidase CwlO	38.0	28.3	67.9
MGA_2345	LOCUS_23000	sequence55:173804..175072(+)	internal_stop_codon	173795..173797(+)		WP_011674167.1	ArdC-like ssDNA-binding domain-containing protein	97.9	47.1	31.9
MGA_2519	LOCUS_24700	sequence58:160197..160394(+)	partial			WP_003723326.1	thioredoxin family protein	100.0	69.1	90.8
MGA_2544	LOCUS_24950	sequence58:181107..>182038(-)	partial			WP_010989982.1	lmo2396 family class 1 internalin	100.0	32.9	80.9
MGA_2650	LOCUS_26000	sequence59:105279..106088(+)	frameshift		106076	WP_003723446.1	DUF3440 domain-containing protein	98.9	61.3	91.0
MGA_2651	LOCUS_26010	sequence59:106147..106584(+)	frameshift		106076	WP_003723446.1	DUF3440 domain-containing protein	100.0	33.4	93.1
MGA_2782	LOCUS_27310	sequence60:63450..65099(+)	partial			WP_011100946.1	glycosyltransferase	64.5	39.8	33.6
MGA_2918	LOCUS_28650	sequence61:38248..38484(+)	partial			WP_003723667.1	IDEAL domain-containing protein	100.0	66.1	96.2
