{ "type": "genome", "identifier": "GCF_014229965.1", "organism": "Peptostreptococcus canis", "title": "Peptostreptococcus canis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Hubei University of Arts and Science", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014229965.1", "bioproject": "PRJNA224116", "biosample": "SAMN14832455", "wgs_master": "JABGBW000000000.1", "refseq_category": "na", "taxid": "1159213", "species_taxid": "1159213", "organism_name": "Peptostreptococcus canis", "infraspecific_name": "strain=DSM 27025", "isolate": "na", "version_status": "latest", "assembly_level": "Scaffold", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/17", "asm_name": "ASM1422996v1", "asm_submitter": "Hubei University of Arts and Science", "gbrs_paired_asm": "GCA_014229965.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/229/965/GCF_014229965.1_ASM1422996v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "2064240", "genome_size_ungapped": "2063580", "gc_percent": "30.500000", "replicon_count": "0", "scaffold_count": "40", "contig_count": "40", "annotation_provider": "NCBI RefSeq", "annotation_name": "NCBI Prokaryotic Genome Annotation Pipeline (PGAP)", "annotation_date": "2024-02-29", "total_gene_count": "1928", "protein_coding_gene_count": "1836", "non_coding_gene_count": "71", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-17", "dateModified": "2020-08-17", "datePublished": "2020-08-17", "_annotation": { "sample_count": 1, "sample_organism": [ "Peptostreptococcus canis" ], "sample_taxid": [ "1159213" ], "sample_host_organism": [ "Labrador retriever dog" ], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "USA" ], "sample_host_location_id": [], "data_size": "0.568 MB", "sample_ph_range": { "min": null, "max": null }, "sample_temperature_range": { "min": null, "max": null }, "completeness": 100.0, "contamination": 0.0, "strain_heterogeneity": 0.0, "genome_count": 1 }, "data_type": "G", "data_source": "RefSeq", "_dfast": { "Total Sequence Length (bp)": "2064240", "Number of Sequences": "40", "Longest Sequences (bp)": "677224", "N50 (bp)": "544388", "Gap Ratio (%)": "0.032167", "GCcontent (%)": "30.3", "Number of CDSs": "1839", "Average Protein Length": "323.6", "Coding Ratio (%)": "86.5", "Number of rRNAs": "2", "Number of tRNAs": "59", "Number of CRISPRs": "1" }, "has_analysis": true, "_dfastqc": { "tc_result": [ { "organism_name": "Peptostreptococcus canis", "strain": "strain=DSM 27025", "accession": "GCA_014229965.1", "taxid": 1159213, "species_taxid": 1159213, "relation_to_type": "type", "validated": true, "ani": 100.0, 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"ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Peptostreptococcus anaerobius", "strain": "strain=DSM 2949", "accession": "GCA_000381525.1", "taxid": 1261, "species_taxid": 1261, "relation_to_type": "type", "validated": true, "ani": 78.6479, "matched_fragments": 114, "total_fragments": 672, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Peptostreptococcus anaerobius", "strain": "strain=VPI 4330", "accession": "GCA_000318115.1", "taxid": 1261, "species_taxid": 1261, "relation_to_type": "type", "validated": true, "ani": 78.5499, "matched_fragments": 107, "total_fragments": 672, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Peptostreptococcus porci", "strain": "strain=WCA-SAB-591-4A-A", "accession": "GCA_009695815.1", "taxid": 2652282, "species_taxid": 2652282, "relation_to_type": "type", "validated": true, "ani": 78.2414, "matched_fragments": 170, "total_fragments": 672, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Peptostreptococcus russellii", "strain": "strain=RT-10B", "accession": "GCA_003012055.1", "taxid": 215200, "species_taxid": 215200, "relation_to_type": "type", "validated": true, "ani": 77.6225, "matched_fragments": 161, "total_fragments": 672, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Paraclostridium bifermentans", "strain": "strain=DSM 14991", "accession": "GCA_019916025.1", "taxid": 1490, "species_taxid": 1490, "relation_to_type": "type", "validated": true, "ani": 76.5472, "matched_fragments": 77, "total_fragments": 672, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Romboutsia timonensis", "strain": "strain=Marseille-P326", "accession": "GCA_900106845.1", "taxid": 1776391, "species_taxid": 1776391, "relation_to_type": "type", "validated": true, "ani": 76.4035, "matched_fragments": 66, "total_fragments": 672, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": 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