{ "type": "genome", "identifier": "GCF_014243395.1", "organism": "Winogradskyella flava", "title": "Winogradskyella flava", "description": "na", "data type": "Genome sequencing and assembly", "organization": "ocean university of China", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014243395.1", "bioproject": "PRJNA224116", "biosample": "SAMN15794147", "wgs_master": "JACLCP000000000.1", "refseq_category": "reference genome", "taxid": "1884876", "species_taxid": "1884876", "organism_name": "Winogradskyella flava", "infraspecific_name": "strain=KCTC 52348", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/18", "asm_name": "ASM1424339v1", "asm_submitter": "ocean university of China", "gbrs_paired_asm": "GCA_014243395.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/243/395/GCF_014243395.1_ASM1424339v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "3858317", "genome_size_ungapped": "3858317", "gc_percent": "35.000000", "replicon_count": "0", "scaffold_count": "11", "contig_count": "11", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014243395.1-RS_2024_05_05", "annotation_date": "2024-05-05", "total_gene_count": "3454", "protein_coding_gene_count": "3403", "non_coding_gene_count": "48", "pubmed_id": "na" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-18", "dateModified": "2020-08-18", "datePublished": "2020-08-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Winogradskyella flava" ], "sample_taxid": [ "1884876" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" ], 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"Winogradskyella algicola", "strain": "strain=IMCC33238", "accession": "GCA_005869935.1", "taxid": 2575815, "species_taxid": 2575815, "relation_to_type": "type", "validated": true, "ani": 78.6616, "matched_fragments": 481, "total_fragments": 1281, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella endarachnes", "strain": "strain=HL2-2", "accession": "GCA_009741275.1", "taxid": 2681965, "species_taxid": 2681965, "relation_to_type": "type", "validated": true, "ani": 78.2194, "matched_fragments": 386, "total_fragments": 1281, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella psychrotolerans", "strain": "strain=RS-3", "accession": "GCA_000427335.1", "taxid": 1344585, "species_taxid": 1344585, "relation_to_type": "type", "validated": true, "ani": 78.1548, "matched_fragments": 400, "total_fragments": 1281, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella schleiferi", "strain": "strain=Z215", "accession": "GCA_013394655.1", "taxid": 2686078, "species_taxid": 2686078, "relation_to_type": "type", "validated": true, "ani": 78.0979, "matched_fragments": 419, "total_fragments": 1281, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella ludwigii", "strain": "strain=HL116", "accession": "GCA_013403985.1", "taxid": 2686076, "species_taxid": 2686076, "relation_to_type": "type", "validated": true, "ani": 78.0779, "matched_fragments": 411, "total_fragments": 1281, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella sediminis", "strain": "strain=DSM 28134", "accession": "GCA_003387355.1", "taxid": 1382466, "species_taxid": 1382466, "relation_to_type": "type", "validated": true, "ani": 78.046, "matched_fragments": 363, "total_fragments": 1281, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Winogradskyella thalassocola", "strain": "strain=DSM 15363", "accession": 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