{ "type": "genome", "identifier": "GCF_014243445.1", "organism": "Gemmobacter straminiformis", "title": "Gemmobacter straminiformis", "description": "na", "data type": "Genome sequencing and assembly", "organization": "Korea University", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014243445.1", "bioproject": "PRJNA224116", "biosample": "SAMN15794117", "wgs_master": "JACLQD000000000.1", "refseq_category": "reference genome", "taxid": "2045119", "species_taxid": "2045119", "organism_name": "Gemmobacter straminiformis", "infraspecific_name": "strain=CAM-8", "isolate": "na", "version_status": "latest", "assembly_level": "Contig", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2020/08/18", "asm_name": "ASM1424344v1", "asm_submitter": "Korea University", "gbrs_paired_asm": "GCA_014243445.1", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/243/445/GCF_014243445.1_ASM1424344v1", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "4120452", "genome_size_ungapped": "4120452", "gc_percent": "65.500000", "replicon_count": "0", "scaffold_count": "16", "contig_count": "16", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014243445.1-RS_2024_04_04", "annotation_date": "2024-04-04", "total_gene_count": "3921", "protein_coding_gene_count": "3845", "non_coding_gene_count": "56", "pubmed_id": "29022543" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2020-08-18", "dateModified": "2020-08-18", "datePublished": "2020-08-18", "_annotation": { "sample_count": 1, "sample_organism": [ "Gemmobacter straminiformis" ], "sample_taxid": [ "2045119" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "South Korea" 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"GCA_008271655.1", "taxid": 2595004, "species_taxid": 2595004, "relation_to_type": "type", "validated": true, "ani": 79.5574, "matched_fragments": 609, "total_fragments": 1367, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Tabrizicola algicola", "strain": "strain=ETT8", "accession": "GCA_010915705.1", "taxid": 2709381, "species_taxid": 2709381, "relation_to_type": "type", "validated": true, "ani": 79.4758, "matched_fragments": 593, "total_fragments": 1367, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmobacter lanyuensis", "strain": "strain=KCTC 23714", "accession": "GCA_014652355.1", "taxid": 1054497, "species_taxid": 1054497, "relation_to_type": "type", "validated": true, "ani": 79.4313, "matched_fragments": 593, "total_fragments": 1367, "ani_threshold": 95, "status": "below_threshold" }, { "organism_name": "Gemmobacter fulva", "strain": "strain=con5", "accession": "GCA_018798885.1", "taxid": 2840474, "species_taxid": 2840474, 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