{ "type": "genome", "identifier": "GCF_014268695.2", "organism": "Pseudomonas ogarae", "title": "Pseudomonas ogarae", "description": "na", "data type": "Genome sequencing and assembly", "organization": "KU Leuven", "publication": [ {} ], "properties": { "assembly_accession": "GCF_014268695.2", "bioproject": "PRJNA224116", "biosample": "SAMN15248336", "wgs_master": "na", "refseq_category": "reference genome", "taxid": "1114970", "species_taxid": "1114970", "organism_name": "Pseudomonas ogarae", "infraspecific_name": "strain=SWRI108", "isolate": "na", "version_status": "latest", "assembly_level": "Complete Genome", "release_type": "Major", "genome_rep": "Full", "seq_rel_date": "2021/07/06", "asm_name": "ASM1426869v2", "asm_submitter": "KU Leuven", "gbrs_paired_asm": "GCA_014268695.2", "paired_asm_comp": "identical", "ftp_path": "https://ftp.ncbi.nlm.nih.gov/genomes/all/GCF/014/268/695/GCF_014268695.2_ASM1426869v2", "excluded_from_refseq": "na", "relation_to_type_material": "assembly from synonym type material", "asm_not_live_date": "na ", "assembly_type": "haploid", "group": "bacteria", "genome_size": "6551245", "genome_size_ungapped": "6551245", "gc_percent": "61.000000", "replicon_count": "1", "scaffold_count": "1", "contig_count": "1", "annotation_provider": "NCBI RefSeq", "annotation_name": "GCF_014268695.2-RS_2024_07_21", "annotation_date": "2024-07-21", "total_gene_count": "5859", "protein_coding_gene_count": "5708", "non_coding_gene_count": "86", "pubmed_id": "34442845;32752051" }, "dbXrefs": [], "distribution": null, "Download": null, "status": "public", "visibility": null, "dateCreated": "2021-07-06", "dateModified": "2021-07-06", "datePublished": "2021-07-06", "_annotation": { "sample_count": 1, "sample_organism": [ "Pseudomonas ogarae" ], "sample_taxid": [ "1114970" ], "sample_host_organism": [], "sample_host_organism_id": [], "sample_host_disease": [], "sample_host_disease_id": [], "sample_host_location": [ "Iran: Kermanshah" ], "sample_host_location_id": 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{ "organism_name": "Pseudomonas brassicacearum subsp. brassicacearum", "strain": "strain=CCUG 51508", "accession": "GCA_008801605.1", "taxid": 86264, "species_taxid": 930166, "relation_to_type": "type", "validated": true, "ani": 95.2583, "matched_fragments": 1896, "total_fragments": 2183, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Pseudomonas brassicacearum", "strain": "strain=JCM 11938", "accession": "GCA_012034345.1", "taxid": 930166, "species_taxid": 930166, "relation_to_type": "suspected-type", "validated": true, "ani": 95.2114, "matched_fragments": 1906, "total_fragments": 2183, "ani_threshold": 95, "status": "inconclusive" }, { "organism_name": "Pseudomonas thivervalensis", "strain": "strain=DSM 13194", "accession": "GCA_001269655.1", "taxid": 86265, "species_taxid": 86265, "relation_to_type": "type", "validated": true, "ani": 92.4865, "matched_fragments": 1838, "total_fragments": 2183, "ani_threshold": 95, "status": "below_threshold" }, { 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